Job Description P21865 Confidence 99.90% Date Thu Jan 5 11:38:35 GMT 2012 Rank 4 Aligned Residues 233 % Identity 16% Template c3d2rB_ PDB info PDB header:transferase Chain: B: PDB Molecule:[pyruvate dehydrogenase [lipoamide]] kinase isozyme 4; PDBTitle: crystal structure of pyruvate dehydrogenase kinase isoform 4 in2 complex with adp Resolution 2.03 Å

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		659	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.						.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.
Predicted Secondary structure																																			.	.	.	.	.
Query SS confidence																																			.	.	.	.	.
Query Sequence		E	R	E	Q	I	R	N	A	L	L	A	A	L	S	H	D	L	R	T	P	L	T	V	L	F	G	Q	A	E	I	L	T	L	.	.	.	.	.	D	L	A	S	E	G	S	P	H	A	R	Q	A	S	E	I	R	Q	H	V	L	N	T	T	R	L	V	N	N	L	L	D	M	A	R	I	Q	S	G	G	F	N
Query Conservation																																			.	.	.	.	.
Alig confidence																																			.	.	.	.	.
Template Conservation
Template Sequence		D	D	Q	K	A	L	S	D	F	V	D	T	L	I	K	V	R	N	R	H	H	N	V	V	P	T	M	A	Q	G	I	I	E	Y	K	A	C	T	V	D	P	V	T	N	Q	N	L	Q	Y	F	L	D	R	F	Y	M	N	R	I	S	T	R	M	L	M	N	Q	H	I	L	I	F	S	D	S	Q	T	G	N	P
Template Known Secondary structure		T																			T	T	T																			T	T	T																															S	S					T
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		734	.	.					.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.												.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.
Predicted Secondary structure					.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.
Query SS confidence					.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.
Query Sequence		L	K	K	.	.	.	.	E	W	L	T	L	E	E	V	V	G	S	A	L	Q	M	L	E	P	G	L	S	.	.	.	.	.	.	.	.	.	.	.	S	P	I	N	L	S	L	P	E	P	L	T	L	I	H	V	D	G	P	L	F	E	R	V	L	I	N	L	L	E	N	A	V	K	Y	.	.	.	.	.	.
Query Conservation					.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.
Alig confidence					.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.
Template Conservation
Template Sequence		S	H	I	G	S	I	D	P	N	C	D	V	V	A	V	V	Q	D	A	F	E	C	S	R	M	L	C	D	Q	Y	Y	L	S	S	P	E	L	K	L	T	Q	V	N	G	K	F	P	D	Q	P	I	H	I	V	Y	V	P	S	H	L	H	H	M	L	F	E	L	F	K	N	A	M	R	A	T	V	E	H	Q	E
Template Known Secondary structure		T	S	B	T	T	B																										S												S	S	S	T	T	S																														T	T
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
			793	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	A	G	A	Q	A	E	I	G	I	D	A	H	V	E	G	E	N	L	Q	L	D	V	W	D	N	G	P	G	L	P	P	G	Q	E	Q	T	I	F	D	K	F	A	R	G	N	K	E	S	A	V	P	G	V	G	L	G	L	A	I	C	R	A	I	V	D	V	H	G	G	T	I	T	A	F	N	R	P	E	G
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		N	Q	P	S	L	T	P	I	E	V	I	V	V	L	G	K	E	D	L	T	I	K	I	S	D	R	G	G	G	V	P	L	R	I	I	D	R	L	F	S	Y	T	Y	S	T	A	P	T	P	P	L	A	G	F	G	Y	G	L	P	I	S	R	L	Y	A	K	Y	F	Q	G	D	L	N	L	Y	S	L	S	G	Y
Template Known Secondary structure		T	S	S	S												S	S										S					G	G	G	T	T	G	G	G	S	T	T			S	S						S	S	S														T	T									T	T	T
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		872	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	C	F	R	V	T	L	P	Q	Q	T	A	P	E	L	E	E	F	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	T	D	A	I	I	Y	L	K	A	L	S	S	E	S	I	E	K	L	P
Template Known Secondary structure											S	S	T	T	T		B
Template Predicted Secondary structure
Template SS confidence
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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