Job Description P21865 Confidence 97.51% Date Thu Jan 5 11:38:35 GMT 2012 Rank 60 Aligned Residues 140 % Identity 11% Template c3ci6B_ PDB info PDB header:transferase Chain: B: PDB Molecule:phosphoenolpyruvate-protein phosphotransferase; PDBTitle: crystal structure of the gaf domain from acinetobacter2 phosphoenolpyruvate-protein phosphotransferase Resolution 1.55 Å

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		510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.											.	570	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	R	T	R	H	L	Y	E	M	S	K	A	L	A	V	G	R	S	P	Q	D	I	A	A	T	S	E	Q	F	I	A	S	T	F	H	A	R	S	Q	V	L	L	P	D	D	N	G	K	L	Q	P	L	T	H	P	Q	G	M	T	.	.	.	.	.	.	.	.	.	.	P	W	D	D	A	I	A	Q	W	S	F
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.
Alig confidence																																																													.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		X	Q	L	D	T	L	R	R	I	V	Q	E	I	N	S	S	V	S	L	H	D	S	L	D	I	X	V	N	Q	V	A	D	A	X	K	V	D	V	C	S	I	Y	L	L	D	E	R	N	Q	R	Y	L	L	X	A	S	K	G	L	N	P	E	S	V	G	H	V	S	L	Q	L	S	E	G	L	V	G	L	V	G
Template Known Secondary structure																T		S	S																	T		S									T	T	T	T									S	S		G	G	G	T	T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		580	.	.	.	.	.												.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	K	G	L	P	A	.	.	.	.	.	.	.	.	.	.	.	G	A	G	T	D	T	L	P	G	V	P	Y	Q	I	L	P	L	K	S	G	E	K	T	Y	G	L	V	V	V	E	P	G	N	L	R	Q	L	M	I	P	E	Q	Q	R	L	L	E	T	F	T	L	L	V	A	N	A	L	E	R	L	T	L	T
Query Conservation								.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.																																				.
Template Conservation																																																						.
Template Sequence		Q	R	E	E	I	V	N	L	E	N	A	S	K	H	E	R	F	A	Y	L	P	G	E	E	I	Y	N	S	F	L	G	V	P	V	X	Y	R	R	K	V	X	G	V	L	V	V	Q	N	K	Q	P	Q	.	D	F	S	E	A	A	E	S	F	L	V	T	L	C	A	Q	L	S	G	V	I	A	H	A	H	A	V
Template Known Secondary structure				T	S					S		G	G	G	G		T	T																				T	T											S	S			.
Template Predicted Secondary structure																																																						.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		649	650
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	N
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		165	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions