Job Description P21865 Confidence 60.46% Date Thu Jan 5 11:38:35 GMT 2012 Rank 386 Aligned Residues 127 % Identity 14% Template c3bi8A_ PDB info PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: structure of dihydrodipicolinate synthase from clostridium2 botulinum Resolution 1.96 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.					.
Predicted Secondary structure																																																																													.	.	.	.
Query SS confidence																																																																													.	.	.	.
Query Sequence		M	N	N	E	P	L	R	P	D	P	D	R	L	L	E	Q	T	A	A	P	H	R	G	K	L	K	V	F	F	G	A	C	A	G	V	G	K	T	W	A	M	L	A	E	A	Q	R	L	R	A	Q	G	L	D	I	V	V	G	V	V	E	T	H	G	R	K	D	T	A	A	M	L	E	G	L	.	.	.	.	A
Query Conservation																																																																													.	.	.	.
Alig confidence								.	.	.	.																					.	.																																												.	.	.	.
Template Conservation								.	.	.	.																					.	.
Template Sequence		M	T	E	T	E	R	.	.	.	.	K	E	T	I	K	F	V	I	D	K	V	N	K	R	I	P	V	I	A	G	.	.	T	G	S	N	N	T	A	A	S	I	A	M	S	K	W	A	E	S	I	G	V	D	G	L	L	V	I	T	P	Y	Y	N	K	T	T	Q	K	G	L	V	K	H	F	K	A	V	S	D
Template Known Secondary structure		S						.	.	.	.												T	T	S	S						.	.				S	S														T	T		S									S	S
Template Predicted Secondary structure								.	.	.	.																					.	.
Template SS confidence
		52	.	.	.	.	.					.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		77	.	.	80	.	.	.	.	.					.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure											.	.	.	.
Query SS confidence											.	.	.	.
Query Sequence		V	L	P	L	K	R	Q	A	Y	.	.	.	.	R	G	R	H	I	S	E	F	D	L	D	A	A	L	A	R	R	P	A	L	I	L	M	D	E	L	A	H	S	N	A	P	G	S	R	H	P	K	R	W	Q	D	I	E	E	L	L	E	A	G	I	D	V	F	T
Query Conservation											.	.	.	.
Alig confidence											.	.	.	.																										.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.
Template Sequence		A	V	S	T	P	I	I	I	Y	N	V	P	G	R	T	G	L	N	I	T	P	G	T	L	K	E	L	C	E	D	K	N	I	V	A	V	K	E	.	.	.	.	.	.	.	A	S	G	N	I	S	Q	I	A	Q	I	K	A	L	C	G	D	K	L	D	I	Y	S
Template Known Secondary structure		T			S												S												T	T	S	S	S							.	.	.	.	.	.	.		S														G	G	G
Template Predicted Secondary structure																																								.	.	.	.	.	.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.								.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions