Job Description P21865 Confidence 89.03% Date Thu Jan 5 11:38:35 GMT 2012 Rank 191 Aligned Residues 121 % Identity 15% Template c2xssB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:cgmp-specific 3', 5'-cyclic phosphodiesterase; PDBTitle: crystal structure of gafb from the human phosphodiesterase 5 Resolution 2.50 Å

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		527	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.																	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.
Query Sequence		S	P	Q	D	I	A	A	T	S	E	Q	F	I	A	S	T	F	H	A	R	S	Q	V	L	L	P	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	K	L	Q	P	L	T	H	P	Q	G	M	T	P	W	D	D	A	I	A	Q	W	S	F	D	K	G	L	P	.	.	.	.	.	.
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.
Template Conservation
Template Sequence		S	L	E	V	I	L	K	K	I	A	A	T	I	I	S	F	M	Q	V	Q	K	C	T	I	F	I	V	D	E	D	C	S	D	S	F	S	S	V	F	H	M	E	C	E	E	L	E	K	S	S	D	T	R	E	H	D	A	N	K	I	N	Y	M	Y	A	Q	Y	V	K	N	T	M	E	P	L	N	I	P	D	V
Template Known Secondary structure																			T		S									S	S		T	T	S															S									T	S	T	T	S								T	T	S	S					S		S
Template Predicted Secondary structure
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
		585	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.				.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.
Query SS confidence																																.	.	.
Query Sequence		A	G	A	G	T	D	T	L	P	G	V	P	Y	Q	I	L	P	L	K	S	G	E	K	T	Y	G	L	V	V	V	.	.	.	E	P	G	N	L	R	Q	L	M	I	P	E	Q	Q	R	L	L	E	T	F	T	L	L	V	A	N	A	L	E	R	L	T	L
Query Conservation																																.	.	.
Alig confidence																																.	.	.
Template Conservation
Template Sequence		S	K	D	K	R	F	P	I	R	S	L	L	C	T	P	I	K	N	G	K	K	N	K	V	I	G	V	C	Q	L	V	N	K	M	E	E	G	K	V	K	P	F	N	R	N	D	E	Q	F	L	E	A	F	V	I	F	C	G	L	G	I	Q	N	T	Q	M
Template Known Secondary structure		T	T		S	S														T	T	S																																									T
Template Predicted Secondary structure
Template SS confidence
		428	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions