Job Description P21865 Confidence 62.76% Date Thu Jan 5 11:38:35 GMT 2012 Rank 362 Aligned Residues 81 % Identity 20% Template c2x8aA_ PDB info PDB header:nuclear protein Chain: A: PDB Molecule:nuclear valosin-containing protein-like; PDBTitle: human nuclear valosin containing protein like (nvl), c-2 terminal aaa-atpase domain Resolution 2.60 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	D	R	L	L	E	Q	T	A	A	P	H	R	G	K	L	K	V	F	F	G	A	C	A	G	V	G	K	T	W	A	M	L	A	E	A	Q	R	L	R	A	Q	G	L	D	I	V	V	G	V	V	E	T	H	G	R	K	D	T	A	A	M	L	E	G	L	A	V	L	P	L	K	R	Q	A	Y	R	G	R
Query Conservation
Alig confidence																	.	.	.																																																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.																																																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	P	D	Q	F	K	A	L	G	L	V	T	P	A	G	.	.	.	V	L	L	A	G	P	P	G	C	G	K	T	L	L	A	K	A	V	A	N	E	S	G	L	N	F	I	S	V	K	G	P	E	L	L	N	M	Y	V	G	E	S	E	R	A	V	R	Q	V	F	Q	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S							T	T					S		.	.	.					S	S	T	T	S													T	T								T	T	T	T		S	S	T	T													.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.	.																																																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		603	.	.	.	.	.	.	610	.	.	.	.	.	.	.				.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	I	S	E	F	D	L	D	A	A	L	A	R	R	P	A	L	I	L	M	D	E	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	R	A	K	N	S	A	P	C	V	I	F	F	D	E	V
Template Known Secondary structure		.	.	.	.	.	.	.	.					T		S							T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										669	670	.	.	.	.	.	.	.	.	.	680	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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