Job Description P21865 Confidence 97.09% Date Thu Jan 5 11:38:35 GMT 2012 Rank 73 Aligned Residues 124 % Identity 13% Template c2vjwA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:gaf family protein; PDBTitle: crystal structure of the second gaf domain of devs from2 mycobacterium smegmatis Resolution 2.0 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		527	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.													.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	P	Q	D	I	A	A	T	S	E	Q	F	I	A	S	T	F	H	A	R	S	Q	V	L	L	P	D	D	N	G	K	L	Q	P	L	T	H	P	Q	G	M	T	P	W	D	D	.	.	.	.	.	.	.	.	.	.	.	.	A	I	A	Q	W	S	F	D	K	G	L	P	A	G	A	G	T	D	T	L	P	G
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	P	A	T	V	F	R	L	V	A	A	E	A	L	T	L	T	G	A	D	G	T	L	V	A	V	P	A	D	A	A	E	E	L	V	I	V	E	V	A	G	A	V	P	A	E	V	E	A	S	A	I	P	V	Q	D	N	A	I	G	Q	A	F	R	D	R	A	P	R	R	L	D	V	L	D	G	P	G	L	G
Template Known Secondary structure			T																		S												S										T	S		G	G	G	T	T					S	S	S	S															S				T	T	S
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		595	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	Y	Q	I	L	P	L	K	S	G	E	K	T	Y	G	L	V	V	V	E	P	G	N	L	R	Q	L	M	I	P	E	Q	Q	R	L	L	E	T	F	T	L	L	V	A	N	A	L	E	R	L	T	L	T	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	P	A	L	V	L	P	L	R	A	T	D	T	V	A	G	V	L	V	A	V	Q	G	S	G	A	R	P	F	T	A	E	Q	L	E	X	X	T	G	F	A	D	Q	A	A	V	A	W	Q	L	A	S	S	Q	R	R
Template Known Secondary structure												T	T												T	T
Template Predicted Secondary structure
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions