Job Description P21865 Confidence 84.46% Date Thu Jan 5 11:38:35 GMT 2012 Rank 211 Aligned Residues 155 % Identity 15% Template c2veaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:phytochrome-like protein cph1; PDBTitle: the complete sensory module of the cyanobacterial2 phytochrome cph1 in the pr-state. Resolution 2.21 Å

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		515	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.													.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	Y	E	M	S	K	A	L	A	V	G	R	S	P	Q	D	I	A	A	T	S	E	Q	F	I	A	S	T	F	H	A	R	S	Q	V	L	L	P	D	D	.	.	.	.	.	.	.	.	.	.	.	.	N	G	K	L	Q	P	L	T	H	P	Q	G	M	T	P	W	D	D	A	I	A	Q	W	S	F	D	K	G
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	Y	H	M	A	N	A	A	L	N	R	L	N	L	R	D	F	Y	D	V	I	V	E	E	V	R	R	M	T	G	F	D	R	V	M	L	Y	R	F	D	E	N	N	H	G	D	V	I	A	E	D	K	R	D	D	M	E	P	Y	L	G	L	H	Y	P	E	S	D	I	P	Q	P	A	R	R	L	F	I	H	N
Template Known Secondary structure		T	T																														S									T	T	S											T	T	S				T	T					G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		583	.	.	.	.	.	.	590	.	.	.																																							.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	P	A	G	A	G	T	D	T	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	P	Y	Q	I	L	P	L	K	S	G	E	K	T	Y	G	L	V	V	V	E	P	G	N	L	R	Q	L	M	I
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Conservation																																																																												.
Template Sequence		P	I	R	V	I	P	D	V	Y	G	V	A	V	P	L	T	P	A	V	N	P	S	T	N	R	A	V	D	L	T	E	S	I	L	R	S	A	Y	H	C	H	L	T	Y	L	K	N	M	G	V	G	A	S	L	T	I	S	L	I	K	D	G	H	L	W	G	L	I	A	C	H	H	Q	T	.	P	K	V	I	P
Template Known Secondary structure		S					S		S	S	S							S	S			T	T	T	T						T	T		S	S	B														T		S										T	T											S	S	.
Template Predicted Secondary structure																																																																												.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.
		625	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	Q	Q	R	L	L	E	T	F	T	L	L	V	A	N	A	L	E	R	L	T	L	T	A	S	E	E	Q	A	R	M	A	S	E	R	E	Q	I	R	N	A	L	L	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	E	L	R	K	A	C	E	F	F	G	R	V	V	F	S	N	I	S	A	Q	E	D	T	E	T	F	D	Y	R	V	Q	L	A	E	H	E	A	V	L	L	D	K	M	T	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions