Job Description P21865 Confidence 74.34% Date Thu Jan 5 11:38:35 GMT 2012 Rank 288 Aligned Residues 138 % Identity 12% Template c2v9dB_ PDB info PDB header:lyase Chain: B: PDB Molecule:yage; PDBTitle: crystal structure of yage, a prophage protein belonging to2 the dihydrodipicolinic acid synthase family from e. coli3 k12 Resolution 2.15 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		M	N	N	E	P	L	R	P	D	P	D	R	L	L	E	Q	T	A	A	P	H	R	G	K	L	K	V	F	F	G	A	C	A	G	V	G	K	T	W	A	M	L	A	E	A	Q	R	L	R	A	Q	G	L	D	I	V	V	G	V	V	E	T	H	G	R	K	D	T	A	A	M	L	E	G	L	A	V	L	.	.
Query Conservation																																																																																.	.
Alig confidence								.	.	.	.																					.	.																																															.	.
Template Conservation								.	.	.	.																					.	.
Template Sequence		L	G	A	E	E	R	.	.	.	.	K	A	I	A	R	F	A	I	D	H	V	D	R	R	V	P	V	L	I	G	.	.	T	G	G	T	N	A	R	E	T	I	E	L	S	Q	H	A	Q	Q	A	G	A	D	G	I	V	V	I	N	P	Y	Y	W	K	V	S	E	A	N	L	I	R	Y	F	E	Q	V	A	D
Template Known Secondary structure		S						.	.	.	.												T	T	S	S						.	.			S	S																T		S								S	S	S
Template Predicted Secondary structure								.	.	.	.																					.	.
Template SS confidence
		63	.	.	.	.	.					.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.			.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
				79	80	.	.	.	.	.	.						.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.				.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.									.	.	.	.	.																																																		.	.	.
Query SS confidence		.	.									.	.	.	.	.																																																		.	.	.
Query Sequence		.	.	P	L	K	R	Q	A	Y	R	.	.	.	.	.	G	R	H	I	S	E	F	D	L	D	A	A	L	A	R	R	P	A	L	I	L	M	D	E	L	A	H	S	N	A	P	G	S	R	H	P	K	R	W	Q	D	I	E	E	L	L	E	A	G	.	.	.	I	D	V	F	T	T	V	N	V	Q	H	L	E
Query Conservation		.	.									.	.	.	.	.																																																		.	.	.
Alig confidence		.	.									.	.	.	.	.																									.	.	.	.	.	.	.																			.	.	.
Template Conservation																																									.	.	.	.	.	.	.
Template Sequence		S	V	T	L	P	V	X	L	Y	N	F	P	A	L	T	G	Q	D	L	T	P	A	L	V	K	T	L	A	D	S	R	S	N	I	I	G	I	K	D	.	.	.	.	.	.	.	T	I	D	S	V	A	H	L	R	S	X	I	H	T	V	K	G	A	H	P	H	F	T	V	L	C	G	Y	D	D	H	L	F	N
Template Known Secondary structure				S	S												S																T	T							.	.	.	.	.	.	.			S																	T	T						S	S	G	G	G
Template Predicted Secondary structure																																									.	.	.	.	.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.								.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		149	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		210	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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