Return to main results Retrieve Phyre Job Id

Job DescriptionP21865
Confidence65.00%DateThu Jan 5 11:38:35 GMT 2012
Rank348Aligned Residues101
% Identity25%Templatec2v1uA_
PDB info PDB header:replicationChain: A: PDB Molecule:cell division control protein 6 homolog; PDBTitle: structure of the aeropyrum pernix orc1 protein in complex2 with dna
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20...... ...30.........40.........50... ......60.........70.........80....
Predicted Secondary structure 



..








....













Query SS confidence 















. .


























. . . .






























Query Sequence  DRLLEQTAAPHRGKLK. . VFFGACAGVGKTWAMLAEAQRLRAQGL. . . . DIVVGVVETHGRKDTAAMLEGLAVLPLKRQA
Query Conservation     
        
 
 ..
  
   




  

         
 ....


 
  
 
 
  
      
   
     
Alig confidence 















..


























....






























Template Conservation    
   
           


 
  
 


 

      
                              
         
Template Sequence  RRLAEVLAPALRGEKPSNALLYGLTGTGKTAVARLVLRRLEARASSLGVLVKPIYVNARHRETPYRVASAIAEAVGVRVP
Template Known Secondary structure  TTGGGTSS





B
TTSST

TTTS
SS



Template Predicted Secondary structure 
























Template SS confidence 















































































   41........50.........60.........70.........80.........90.........100.........110.........120
 
   85....90.........100. ........110.
Predicted Secondary structure 




....




Query SS confidence 
















. . . .









Query Sequence  YRGRHISEFDLDAALAR. . . . RPALILMDEL
Query Conservation         
 
    
  .... 
   




Alig confidence 
















....









Template Conservation                            


  
Template Sequence  FTGLSVGEVYERLVKRLSRLRGIYIIVLDEI
Template Known Secondary structure  SS


TTS
STT
Template Predicted Secondary structure 









Template SS confidence 






























   121........130.........140.........150.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions