Job Description P21865 Confidence 95.99% Date Thu Jan 5 11:38:35 GMT 2012 Rank 106 Aligned Residues 126 % Identity 14% Template c2qybA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:membrane protein, putative; PDBTitle: crystal structure of the gaf domain region of putative membrane2 protein from geobacter sulfurreducens pca Resolution 2.40 Å

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		519	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.											570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.
Query Sequence		S	K	A	L	A	V	G	R	S	P	Q	D	I	A	A	T	S	E	Q	F	I	A	S	T	F	H	A	R	S	Q	V	L	L	P	D	D	N	G	K	L	Q	P	L	T	H	P	Q	G	M	T	P	.	.	.	.	.	.	.	.	.	.	W	D	D	A	I	A	Q	W	S	F	D	K	G	L	P	A	G	A	G
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.
Alig confidence																																																					.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	E	I	X	N	R	T	L	D	L	Q	I	I	X	D	D	L	L	N	L	L	L	K	E	F	K	L	D	L	A	V	I	R	L	V	D	E	K	G	V	L	R	V	R	S	Y	S	G	K	G	I	A	G	I	A	G	K	D	W	E	P	E	I	E	T	Y	I	G	E	A	F	L	S	N	R	L	Q	F	V	N
Template Known Secondary structure																										S	S		S									T	T	S										S		T	T	S	T	T		S		B				T	T	S									T	S					S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		589	590	.	.	.	.	.														.	.	.	.	600	.	.	.	.	.	.	.		.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query Sequence		T	D	T	L	P	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Y	Q	I	L	P	L	K	S	G	E	K	.	T	Y	G	L	V	V	V	E	P	G	N	L	R	Q	L	M	I	P	E	Q	Q	R	L	L	E	T	F	T	L	L	V	A	N	A	L	E	R
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.													.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation
Template Sequence		D	T	Q	Y	X	T	K	P	L	T	R	E	L	X	Q	K	E	G	I	K	S	F	A	H	I	P	I	S	R	K	G	E	P	P	F	G	I	L	S	V	F	S	R	T	I	V	G	L	F	N	E	P	F	L	N	L	L	E	S	L	A	G	Q	L	A	Q	A	V	K	I
Template Known Secondary structure			G	G	G		S											T	T												T	T	S											S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions