Job Description P21865 Confidence 93.61% Date Thu Jan 5 11:38:35 GMT 2012 Rank 143 Aligned Residues 116 % Identity 22% Template c2qq0B_ PDB info PDB header:transferase Chain: B: PDB Molecule:thymidine kinase; PDBTitle: thymidine kinase from thermotoga maritima in complex with2 thymidine + appnhp Resolution 1.50 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	L	K	V	F	F	G	A	C	A	G	V	G	K	T	W	A	M	L	A	E	A	Q	R	L	R	A	Q	G	L	D	I	V	V	G	V	V	E	T	H	G	R	K	D	T	A	A	M	L	E	G	L	A	V	L	P	L	K	R	Q	A	Y	R	G	R	H	I	S	E	F	D	L	D	A	A	L	A	R	R
Query Conservation
Alig confidence											.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	K	L	T	V	I	T	G	P	.	M	Y	S	G	K	T	T	E	L	L	S	F	V	E	I	Y	K	L	G	K	K	K	V	A	V	F	K	P	K	S	T	M	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	H	V	E	A	H	V	I	E	R	P	E	E	M	R	K	Y	I	E	E	D
Template Known Secondary structure										S	.	T	T	S	S															T	T												B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					B					S	S	G	G	G	G	G	G	G			T	T
Template Predicted Secondary structure											.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.																.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.												140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	A	L	I	L	M	D	E	L	A	H	S	N	A	P	G	S	R	H	P	K	R	W	Q	D	I	E	E	L	L	E	A	G	I	D	V	F	.	.	.	.	.	.	.	.	.	.	.	T	T	V	N	V	Q	H	L	E	S	L	N	D	V	V	S	G	V	T	G	I
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.
Template Sequence		T	R	G	V	F	I	D	E	V	Q	F	F	.	.	.	.	.	.	N	P	S	L	F	E	V	V	K	D	L	L	D	R	G	I	D	V	F	C	A	G	L	D	L	T	H	K	Q	N	P	F	E	T	T	A	L	L	L	S	L	A	D	T	V	I	K	K	K	A	V
Template Known Secondary structure										G	G	G	S	.	.	.	.	.	.		T	T											T	T									S	B		T	T	S		B												S							B
Template Predicted Secondary structure														.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.							.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions