Job Description P21865 Confidence 53.69% Date Thu Jan 5 11:38:35 GMT 2012 Rank 454 Aligned Residues 164 % Identity 15% Template c2qbyB_ PDB info PDB header:replication/dna Chain: B: PDB Molecule:cell division control protein 6 homolog 3; PDBTitle: crystal structure of a heterodimer of cdc6/orc1 initiators2 bound to origin dna (from s. solfataricus) Resolution 3.35 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.									.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure															.	.																													.	.	.	.	.	.	.	.
Query SS confidence															.	.																													.	.	.	.	.	.	.	.
Query Sequence		D	R	L	L	E	Q	T	A	A	P	H	R	G	.	.	K	L	K	V	F	F	G	A	C	A	G	V	G	K	T	W	A	M	L	A	E	A	Q	R	L	R	A	Q	.	.	.	.	.	.	.	.	G	L	D	I	V	V	G	V	V	E	T	H	G	R	K	D	T	A	A	M	L	E	G	L	A	V	L	P	L
Query Conservation															.	.																													.	.	.	.	.	.	.	.
Alig confidence															.	.																													.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	D	A	A	I	A	I	R	Y	F	V	K	N	E	V	K	F	S	N	L	F	L	G	L	T	G	T	G	K	T	F	V	S	K	Y	I	F	N	E	I	E	E	V	K	K	E	D	E	E	Y	K	D	V	K	Q	A	Y	V	N	C	R	E	V	G	G	T	P	Q	A	V	L	S	S	L	A	G	K	L	T	G
Template Known Secondary structure													T	T												T	T	S	S																			S	S	S	S	T	T													S
Template Predicted Secondary structure
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.				.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure															.	.																																													.	.	.
Query SS confidence															.	.																																													.	.	.
Query Sequence		K	R	Q	A	Y	R	G	R	H	I	S	E	F	.	.	D	L	D	A	A	L	A	R	R	P	A	L	I	L	M	D	E	L	A	H	S	N	A	P	G	S	R	H	P	K	R	W	Q	D	I	E	E	L	L	E	A	G	I	D	.	.	.	V	F	T	T	V	N	V	Q	H	L	E	S	L	N	D	V	V	S
Query Conservation															.	.																																													.	.	.
Alig confidence															.	.																									.	.	.	.																	.	.	.
Template Conservation																																									.	.	.	.
Template Sequence		F	S	V	P	K	H	G	I	N	L	G	E	Y	I	D	K	I	K	N	G	T	R	N	I	R	A	I	I	Y	L	D	E	V	D	T	L	V	K	R	.	.	.	.	R	G	G	D	I	V	L	Y	Q	L	L	R	S	D	A	N	I	S	V	I	M	I	S	N	D	I	N	V	R	D	Y	M	E	P	R	V	L
Template Known Secondary structure		S				S	S	S	S		T												S	S	S								T	T						S	.	.	.	.	T	T	S									T	S	S	S									S	S	T	T	T	T	T	T	S
Template Predicted Secondary structure																																									.	.	.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.					.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	T	G	I	Q	V	R	E	T	V	P	D	P	F	F	D	A	A	D	D	V	V	L	V	D	L	P	P	D	D	L	R	Q	R	L	K	E
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	S	L	G	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	I	F	K	P	Y	D	A	E	Q	L	K	F	I	L	S	K
Template Known Secondary structure			T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		196	.	.	.	200																.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions