Job Description P21865 Confidence 99.90% Date Thu Jan 5 11:38:35 GMT 2012 Rank 5 Aligned Residues 229 % Identity 15% Template c2q8fA_ PDB info PDB header:transferase Chain: A: PDB Molecule:[pyruvate dehydrogenase [lipoamide]] kinase isozyme 1; PDBTitle: structure of pyruvate dehydrogenase kinase isoform 1 Resolution 2.03 Å

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		659	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.					.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.
Predicted Secondary structure																																			.	.	.	.
Query SS confidence																																			.	.	.	.
Query Sequence		E	R	E	Q	I	R	N	A	L	L	A	A	L	S	H	D	L	R	T	P	L	T	V	L	F	G	Q	A	E	I	L	T	L	.	.	.	.	D	L	A	S	E	G	S	P	H	A	R	Q	A	S	E	I	R	Q	H	V	L	N	T	T	R	L	V	N	N	L	L	D	M	A	R	I	Q	S	G	G	F	N	L
Query Conservation																																			.	.	.	.
Alig confidence																																			.	.	.	.																																				.	.	.	.
Template Conservation																																																																										.	.	.	.
Template Sequence		E	D	A	K	A	I	Y	D	F	T	D	T	V	I	R	I	R	N	R	H	N	D	V	I	P	T	M	A	Q	G	V	I	E	Y	K	E	S	F	D	P	V	T	S	Q	N	V	Q	Y	F	L	D	R	F	Y	M	S	R	I	S	I	R	M	L	L	N	Q	H	S	L	L	F	G	.	.	.	.	H	I	G	S
Template Known Secondary structure		T																			T	T	T																																																			.	.	.	.		B	T	T
Template Predicted Secondary structure																																																																										.	.	.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.					.	.	.	.
		735	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.												760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.								.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.
Query Sequence		K	K	E	W	L	T	L	E	E	V	V	G	S	A	L	Q	M	L	E	P	G	L	S	S	P	.	.	.	.	.	.	.	.	.	.	.	I	N	L	S	L	P	E	P	L	T	L	I	H	V	D	G	P	L	F	E	R	V	L	I	N	L	L	E	N	A	V	K	Y	.	.	.	.	.	.	.	A	G	A	Q
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	N	P	N	C	N	V	L	E	V	I	K	D	G	Y	E	N	A	R	R	L	C	D	L	Y	Y	I	N	S	P	E	L	E	L	E	E	L	N	A	K	S	P	G	Q	P	I	Q	V	V	Y	V	P	S	H	L	Y	H	M	V	F	E	L	F	K	N	A	M	R	A	T	M	E	H	H	A	N	R	G	V	Y
Template Known Secondary structure		B																										S												S	S	S	T	T	S																														S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		797	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.									.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.
Query Sequence		A	E	I	G	I	D	A	H	V	E	G	E	N	L	Q	L	D	V	W	D	N	G	P	G	L	P	P	G	Q	E	Q	T	I	F	D	K	F	A	R	G	N	K	E	S	A	V	P	.	.	.	.	.	.	.	.	G	V	G	L	G	L	A	I	C	R	A	I	V	D	V	H	G	G	T	I	T	A	F	N	R
Query Conservation																																																	.	.	.	.	.	.	.	.
Alig confidence																																																	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	P	I	Q	V	H	V	T	L	G	N	E	D	L	T	V	K	M	S	D	R	G	G	G	V	P	L	R	K	I	D	R	L	F	N	Y	M	Y	S	T	A	P	R	P	R	V	E	T	S	R	A	V	P	L	A	G	F	G	Y	G	L	P	I	S	R	L	Y	A	Q	Y	F	Q	G	D	L	K	L	Y	S	L
Template Known Secondary structure												S	S										S									G	G	G	G		T	T	T	T							S	S			S				S	S		T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
		869	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	G	G	A	C	F	R	V	T	L	P	Q	Q	T	A	P	E	L	E	E	F	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	G	Y	G	T	D	A	V	I	Y	I	K	A	L	S	T	D	S	I	E	R	L	P
Template Known Secondary structure		T	T	T										S	S	T	T	T		B
Template Predicted Secondary structure
Template SS confidence
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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