Job Description P21865 Confidence 98.77% Date Thu Jan 5 11:38:35 GMT 2012 Rank 31 Aligned Residues 116 % Identity 17% Template c2q2eB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:type 2 dna topoisomerase 6 subunit b; PDBTitle: crystal structure of the topoisomerase vi holoenzyme from2 methanosarcina mazei Resolution 4.00 Å

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		778	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.				.	.	800	.	.	.	.	.	.	.		.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.		.	.	.	.	850	.	.
Predicted Secondary structure																						.	.	.											.																																							.
Query SS confidence																						.	.	.											.																																							.
Query Sequence		F	E	R	V	L	I	N	L	L	E	N	A	V	K	Y	A	G	A	Q	A	.	.	.	E	I	G	I	D	A	H	V	E	G	.	E	N	L	Q	L	D	V	W	D	N	G	P	G	L	P	P	G	Q	E	Q	T	I	F	D	K	F	A	R	G	N	K	E	S	A	V	P	G	V	.	G	L	G	L	A	I	C
Query Conservation																						.	.	.											.																																							.
Alig confidence																						.	.	.											.																																							.
Template Conservation
Template Sequence		L	I	T	T	V	K	E	A	V	D	N	A	L	D	A	C	E	E	A	G	I	L	P	D	I	L	V	Q	V	E	R	T	G	P	D	Y	V	T	V	I	I	E	D	N	G	P	G	I	V	R	E	Q	I	P	K	V	F	A	K	L	L	Y	G	F	H	A	L	K	S	R	G	Q	Q	G	I	G	I	S	A	A
Template Known Secondary structure																		T	T	T	S		S											T	T	T										S					G	G	G						S													S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		853	.	.	.	.	.	.	860	.	.		.	.	.	.	.	.		.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.
Predicted Secondary structure												.							.
Query SS confidence												.							.
Query Sequence		R	A	I	V	D	V	H	G	G	T	.	I	T	A	F	N	R	.	P	E	G	G	A	C	F	R	V	T	L	P	Q	Q	T	A	P	E	L	E	E	F	H	E	D
Query Conservation												.							.
Alig confidence												.							.
Template Conservation
Template Sequence		V	L	Y	A	Q	M	T	A	G	R	H	T	K	I	L	S	K	T	S	P	T	A	P	A	H	Y	Y	E	L	M	I	N	T	S	T	N	E	P	D	I	L	V	D
Template Known Secondary structure									T											S	S	S	S											S	S	S		S
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions