 |
| Job Description | P21865 | | Confidence | 50.35% | Date | Thu Jan 5 11:38:35 GMT 2012 |
| Rank | 499 | Aligned Residues | 60 |
| % Identity | 17% | Template | c2nvwB_ |
| PDB info |
PDB header:transcription | Chain: B: PDB Molecule:galactose/lactose metabolism regulatory protein |
PDBTitle: crystal sctucture of transcriptional regulator gal80p from2 kluyveromymes lactis
|
| Resolution | 2.10 Å |
|
| | |
94 | . | . | . | . | . | 100 | . | |
. | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . |
| Predicted Secondary structure | |
|  | | | | | |
| . |
|
|
|  | | | |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | | | | | | | | |
|
|
|
| | | | . | . | . | . | . | . | . | . | . | . | | | | | | | | | | | | | | | | | |
|
|
|
|
|
| Query SS confidence | |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
D | L | D | A | A | L | A | R | . |
R | P | A | L | I | L | M | D | E | L | A | H | S | N | A | P | G | S | R | H | P | K | R | W | Q | D | I | E | E | L | L | E | A | G | I | D | V | F | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | V | N | V | Q | H | L | E | S | L | N | D | V | V | S | G | V | T | G | I | Q | V |
| Query Conservation | |
| | | | |
| | | . | |
| | | |
|
|
|
|
|
|
| |
| | | | | | | |
|
| | |
|
| | |
|
| | |
|
| |
| |
| . | . | . | . | . | . | . | . | . | . |
| |
| |
|
| |
|
| | | | |
| | | |
| | | | |
| Alig confidence | |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| | |
|
|
| | | | |
|
|
|
| |
| . | . | . | . | . | . | . | . | . | |
|
| | | |
| | | | | | |
|
| |
|
| | |
| | |
|
| |
| | |
|
|
| |
| | | | |
|
| | |
| | | | | | | | | | | | |
| Template Sequence | |
S | L | E | S | F | A | Q | Y | K | D | I | D | M | I | V | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
S | V | K | V | P | E | H | Y | E | V | V | K | N | I | L | E | H | S | S | Q | N | L | N | L | R | Y | L | Y | V | E | W | A | L | A | A | S | V | Q | Q | A | E | E | L | Y | S | I | S | Q | Q | R | A | N | L | Q | T |
| Template Known Secondary structure | |
| | | | | | |
| T | T |
| S | | | | | . | . | . | . | . | . | . | . | . |
| S |
| | | | | | | | | | | | | | T | T | T | T |
| S | S |
|
| | | | | | S | S | S | S | S | S | | | | | | | | | | | | | T |
| T | T |
| | |
| Template Predicted Secondary structure | |
| | | | | |
|
|
|
|
|
| | | | | . | . | . | . | . | . | . | . | . | |
|
|
| | | | | | | | | | | | |
|
|
|
|
|
|
|
|
|
|
|
|
| | | | | |
|
| | | | | | | | | | | | | |
|
|
| | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
