Job Description P21865 Confidence 96.26% Date Thu Jan 5 11:38:35 GMT 2012 Rank 100 Aligned Residues 101 % Identity 16% Template c2ja1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:thymidine kinase; PDBTitle: thymidine kinase from b. cereus with ttp bound as phosphate2 donor. Resolution 2.8 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.							.	.
Predicted Secondary structure																																																																										.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.
Query Sequence		H	R	G	K	L	K	V	F	F	G	A	C	A	G	V	G	K	T	W	A	M	L	A	E	A	Q	R	L	R	A	Q	G	L	D	I	V	V	G	V	V	E	T	H	G	R	K	D	T	A	A	M	L	E	G	L	A	V	L	P	L	K	R	Q	A	Y	R	G	R	H	I	S	E	.	.	.	.	.	.	F	D
Query Conservation																																																																										.	.	.	.	.	.
Alig confidence													.																										.	.				.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Conservation													.																										.	.				.	.	.	.	.	.	.	.	.
Template Sequence		Q	N	G	W	I	E	V	I	C	G	S	.	M	F	S	G	K	S	E	E	L	I	R	R	V	R	R	T	Q	F	A	K	Q	H	A	I	V	.	.	F	K	P	.	.	.	.	.	.	.	.	.	C	I	D	N	R	Y	S	E	E	D	V	V	S	H	N	G	L	K	V	K	A	V	P	V	S	A	S	K	D
Template Known Secondary structure												S	.	T	T	S	S															T	T						.	.				.	.	.	.	.	.	.	.	.	T	T			S	S		S	S					T	T	S									S	S	G	G	G
Template Predicted Secondary structure													.																										.	.				.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.										.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	A	A	L	A	R	R	P	A	L	I	L	M	D	E	L	A	H	S	N	A	P	G	S	R	H	P	K	R	W	Q	D	I	E	E	L	L	E	A	G	I	D	V	F
Query Conservation
Alig confidence																						.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.
Template Sequence		I	F	E	H	I	T	E	E	L	D	V	I	A	I	D	E	V	Q	F	F	.	.	.	.	.	.	D	G	D	I	V	E	V	V	Q	V	L	A	N	R	G	Y	R	V	I
Template Known Secondary structure		G	G	G	G			S	S							S	S	G	G	G	S	.	.	.	.	.	.		T	T											T	T
Template Predicted Secondary structure																						.	.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.							.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions