Job Description P21865 Confidence 91.82% Date Thu Jan 5 11:38:35 GMT 2012 Rank 167 Aligned Residues 96 % Identity 23% Template c2j7pA_ PDB info PDB header:signal recognition Chain: A: PDB Molecule:signal recognition particle protein; PDBTitle: gmppnp-stabilized ng domain complex of the srp gtpases ffh2 and ftsy Resolution 1.97 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.						.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.
Query SS confidence																																												.	.	.	.	.
Query Sequence		H	R	G	K	L	K	V	F	F	G	A	C	A	G	V	G	K	T	W	A	M	L	A	E	A	Q	R	L	R	A	Q	G	L	D	I	V	V	G	V	V	E	T	.	.	.	.	.	H	G	R	K	D	T	A	A	M	L	E	G	L	A	V	L	P	L	K	R	Q	A	Y	R	G	R	H	I	S	E	F	D	L
Query Conservation																																												.	.	.	.	.
Alig confidence														.																														.	.	.	.	.																							.	.	.	.	.	.	.	.	.
Template Conservation														.																																																									.	.	.	.	.	.	.	.	.
Template Sequence		K	D	R	N	L	W	F	L	V	G	L	Q	.	G	S	G	K	T	T	T	A	A	K	L	A	L	Y	Y	K	G	K	G	R	R	P	L	L	V	A	A	D	T	Q	R	P	A	A	R	E	Q	L	R	L	L	G	E	K	V	G	V	P	V	L	E	V	M	D	G	E	.	.	.	.	.	.	.	.	.	S	P
Template Known Secondary structure			S	S								S	T	.	T	S	S														T	T	T											S	S	T	T													T								T	T		.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure														.																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.										.	.
		96	.	.	.									100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.
Query Sequence		D	A	A	L	.	.	.	.	.	.	.	.	A	R	R	P	A	L	I	L	M	D	E	L	A	H	S	N	A	P	G	S	R	H	P	K	R	W	Q	D	I	E	E	L	L	E
Query Conservation						.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.												.			.	.	.	.	.	.
Template Conservation																									.			.	.	.	.	.	.
Template Sequence		E	S	I	R	R	R	V	E	E	K	A	R	L	E	A	R	D	L	I	L	V	D	T	.	A	G	.	.	.	.	.	.	R	L	Q	I	D	E	P	L	M	G	E	L	A	R
Template Known Secondary structure															T	T									.			.	.	.	.	.	.			T	T
Template Predicted Secondary structure																									.			.	.	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190							.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions