Job Description P21865 Confidence 64.39% Date Thu Jan 5 11:38:35 GMT 2012 Rank 352 Aligned Residues 133 % Identity 14% Template c2gx5B_ PDB info PDB header:transcription Chain: B: PDB Molecule:gtp-sensing transcriptional pleiotropic repressor cody; PDBTitle: n-terminal gaf domain of transcriptional pleiotropic repressor cody Resolution 1.74 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		512	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570												.	.	.	.	.	.	.	.	.	580
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	R	H	L	Y	E	M	S	K	A	L	A	V	G	R	S	P	Q	D	I	A	A	T	S	E	Q	F	I	A	S	T	F	H	A	R	S	Q	V	L	L	P	D	D	N	G	K	L	Q	P	L	T	H	P	Q	G	M	T	P	W	.	.	.	.	.	.	.	.	.	.	.	D	D	A	I	A	Q	W	S	F	D
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																									.	.																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.
Template Sequence		L	Q	K	T	R	I	I	N	S	M	L	Q	A	A	A	G	K	P	V	N	F	K	E	M	A	E	T	L	R	D	V	I	D	S	N	I	F	V	V	.	.	S	R	R	G	K	L	L	G	Y	S	I	N	Q	Q	I	E	N	D	R	M	K	K	M	L	E	D	R	Q	F	P	E	E	Y	T	K	N	L	F	N
Template Known Secondary structure														S				S																T	S						.	.		T	T	S	B							S	S														T	B											T
Template Predicted Secondary structure																																									.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		581	.	.	.	.	.	.													.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	G	L	P	A	G	A	.	.	.	.	.	.	.	.	.	.	.	.	G	T	D	T	L	P	G	V	P	Y	Q	I	L	P	L	K	S	G	E	K	T	Y	G	L	V	V	V	E	P	G	N	L	R	Q	L	M	I	P	E	Q	Q	R	L	L	E	T	F	T	L	L	V	A	N	A	L	E	R	L	T	L	T
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Template Conservation																																																						.	.
Template Sequence		V	P	E	T	S	S	N	L	D	I	N	S	E	T	A	F	P	V	E	N	R	D	L	F	Q	A	G	L	T	T	I	V	P	I	I	G	G	G	E	R	L	G	T	L	I	L	S	R	L	Q	D	Q	.	.	F	N	D	D	D	L	I	L	A	E	Y	G	A	T	V	V	G	M	E	I	L	R	E	K	A	E
Template Known Secondary structure				S							T	T					S		G	G	G	G	G	G	G	S	S	S										T	T											S	S			.	.																									T
Template Predicted Secondary structure																																																						.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions