Job Description P21865 Confidence 63.35% Date Thu Jan 5 11:38:35 GMT 2012 Rank 357 Aligned Residues 145 % Identity 15% Template c2chgB_ PDB info PDB header:dna-binding protein Chain: B: PDB Molecule:replication factor c small subunit; PDBTitle: replication factor c domains 1 and 2 Resolution 2.1 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	L	L	E	Q	T	A	A	P	H	R	G	K	L	K	V	F	F	G	A	C	A	G	V	G	K	T	W	A	M	L	A	E	A	Q	R	L	R	A	Q	G	L	D	I	V	V	G	V	V	E	T	H	G	R	K	D	T	A	A	M	L	E	G	L	A	V	L	P	L	K	R	Q	A	Y	R	G	R	H	I
Query Conservation
Alig confidence																	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	R	L	K	G	Y	V	E	R	K	N	I	P	H	L	.	.	L	F	S	G	P	P	G	T	G	K	T	A	T	A	I	A	L	A	R	D	L	F	G	E	N	W	R	D	N	F	I	E	M	N	A	S	D	E	R	G	I	D	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	H	K	I	K
Template Known Secondary structure										T	T						.	.				S		T	T	S	S														G	G	G	T	G	G	G						T	T		T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.															.	.	.	.	90
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	F	D	L	D	A	A	L	A	R	R	P	A	L	I	L	M	D	E	L	A	H	S	N	A	P	G	S	R	H	P	K	R	W	Q	D	I	E	E	L	L	E	A	G	I	D	V	F	T	T	V	N	V	Q	H	L	E	S	L	N	D	V	V	S	G	V	T	G	I	Q	V	R	E	T	V	P	D	P	F
Query Conservation
Alig confidence																											.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	F	A	R	T	A	P	I	G	G	A	P	F	K	I	I	F	L	D	E	A	D	A	L	T	.	.	.	A	D	A	Q	A	A	L	R	R	T	M	E	M	Y	S	K	S	C	R	F	I	L	S	C	N	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	R	I	I	E	P	I
Template Known Secondary structure					T	S			S	T	T		S								T	G	G	G	S		.	.	.															T	T	T								S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	S
Template Predicted Secondary structure																											.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.				.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.																			.	.	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	A	A	D	D	V	V	L	V	D	L	P	P	D	D	L	R	Q	R	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	S	R	C	A	V	F	R	F	K	P	V	P	K	E	A	M	K	K	R	L	L
Template Known Secondary structure				T
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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