Job Description P21865 Confidence 94.19% Date Thu Jan 5 11:38:35 GMT 2012 Rank 135 Aligned Residues 91 % Identity 25% Template c2c5sA_ PDB info PDB header:rna-binding protein Chain: A: PDB Molecule:probable thiamine biosynthesis protein thii; PDBTitle: crystal structure of bacillus anthracis thii, a trna-2 modifying enzyme containing the predicted rna-binding3 thump domain Resolution 2.5 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.						.	.	.	.	.	.	.	320
Predicted Secondary structure																																																																					.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.
Query Sequence		V	W	H	T	R	D	A	I	L	L	C	I	G	H	N	T	G	S	E	K	L	V	R	A	A	A	R	L	A	S	R	L	G	S	V	W	H	A	V	Y	V	E	T	P	A	L	H	R	L	P	E	K	K	R	R	A	I	L	S	A	L	R	L	A	Q	E	L	.	.	.	.	.	G	A	E	T	A	T	L	S
Query Conservation																																																																					.	.	.	.	.
Alig confidence																					.	.	.	.																						.	.	.	.	.																			.	.	.	.	.
Template Conservation																					.	.	.	.																						.	.	.	.	.
Template Sequence		P	V	G	V	G	G	K	V	M	V	L	L	S	G	G	I	D	S	P	.	.	.	.	V	A	A	Y	L	T	M	K	R	G	V	S	V	E	A	V	H	F	H	S	P	.	.	.	.	.	P	F	T	S	E	R	A	K	Q	K	V	I	D	L	A	Q	E	L	T	K	Y	C	K	R	V	T	L	H	L	V	P
Template Known Secondary structure			T	T	T	T									S	S	S				.	.	.	.									B	T											T	.	.	.	.	.	T	T	S																G	G	G	S	S
Template Predicted Secondary structure																					.	.	.	.																						.	.	.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.					.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.						.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		321	.	.	.	.	.	.	.	.	330	.																						.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	P	A	E	E	K	A	V	V	R	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	E	H	N	L	G	K	I	I	L	G	R	P
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	T	E	V	Q	K	T	I	N	K	E	I	P	S	S	Y	S	M	T	V	M	R	R	M	M	M	R	I	T	E	R	I	A	E	E	R	N	A	L	A	I	T	T	G	E	S
Template Known Secondary structure													S		G	G	G																				T	T
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions