Job Description P21865 Confidence 99.88% Date Thu Jan 5 11:38:35 GMT 2012 Rank 6 Aligned Residues 229 % Identity 17% Template c2bu8A_ PDB info PDB header:transferase Chain: A: PDB Molecule:pyruvate dehydrogenase kinase isoenzyme 2; PDBTitle: crystal structures of human pyruvate dehydrogenase kinase 22 containing physiological and synthetic ligands Resolution 2.5 Å

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		659	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.							.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.
Predicted Secondary structure																																			.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.
Query Sequence		E	R	E	Q	I	R	N	A	L	L	A	A	L	S	H	D	L	R	T	P	L	T	V	L	F	G	Q	A	E	I	L	T	L	.	.	.	.	.	.	D	L	A	S	E	G	S	P	H	A	R	Q	A	S	E	I	R	Q	H	V	L	N	T	T	R	L	V	N	N	L	L	D	M	A	R	I	Q	S	G	G	F
Query Conservation																																			.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.
Template Conservation
Template Sequence		E	D	H	R	T	L	S	Q	F	T	D	A	L	V	T	I	R	N	R	H	N	D	V	V	P	T	M	A	Q	G	V	L	E	Y	K	D	T	Y	G	D	D	P	V	S	N	Q	N	I	Q	Y	F	L	D	R	F	Y	L	S	R	I	S	I	R	M	L	I	N	Q	H	T	L	I	F	D	G	S	T	N	P	A
Template Known Secondary structure		T	S	T	T	T	T														T	T	T																																																			T	S	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		733	.	.	.						.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.									.	.	.	.	760	.	.	.	.				.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.
Predicted Secondary structure						.	.	.	.	.																				.	.	.	.	.	.	.	.										.	.	.																													.	.	.	.
Query SS confidence						.	.	.	.	.																				.	.	.	.	.	.	.	.										.	.	.																													.	.	.	.
Query Sequence		N	L	K	K	.	.	.	.	.	E	W	L	T	L	E	E	V	V	G	S	A	L	Q	M	L	E	P	G	.	.	.	.	.	.	.	.	L	S	S	P	I	N	L	S	L	.	.	.	P	E	P	L	T	L	I	H	V	D	G	P	L	F	E	R	V	L	I	N	L	L	E	N	A	V	K	Y	.	.	.	.
Query Conservation						.	.	.	.	.																				.	.	.	.	.	.	.	.										.	.	.																													.	.	.	.
Alig confidence						.	.	.	.	.																				.	.	.	.	.	.	.	.										.	.	.																													.	.	.	.
Template Conservation
Template Sequence		H	P	K	H	I	G	S	I	D	P	N	C	N	V	S	E	V	V	K	D	A	Y	D	M	A	K	L	L	C	D	K	Y	Y	M	A	S	P	D	L	E	I	Q	E	I	N	A	A	N	S	K	Q	P	I	H	M	V	Y	V	P	S	H	L	Y	H	M	L	F	E	L	F	K	N	A	M	R	A	T	V	E	S
Template Known Secondary structure		S		S		B	T	T	B																										S												S	S	S	T	T	S																													T
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
					793	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	A	G	A	Q	A	E	I	G	I	D	A	H	V	E	G	E	N	L	Q	L	D	V	W	D	N	G	P	G	L	P	P	G	Q	E	Q	T	I	F	D	K	F	A	R	G	N	K	E	S	A	V	P	G	V	G	L	G	L	A	I	C	R	A	I	V	D	V	H	G	G	T	I	T	A	F	N	R	P
Query Conservation		.	.	.
Alig confidence		.	.	.																																																.	.	.	.
Template Conservation																																																				.	.	.	.
Template Sequence		H	E	S	S	L	I	L	P	P	I	K	V	M	V	A	L	G	E	E	D	L	S	I	K	M	S	D	R	G	G	G	V	P	L	R	K	I	E	R	L	F	S	Y	M	Y	S	T	P	L	A	.	.	.	.	G	F	G	Y	G	L	P	I	S	R	L	Y	A	K	Y	F	Q	G	D	L	Q	L	F	S	M	E
Template Known Secondary structure		T	T	T		S													S	S																			G	G	G	G		T	T	T	T					.	.	.	.		S	S													T	T									T
Template Predicted Secondary structure																																																				.	.	.	.
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.					.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	G	A	C	F	R	V	T	L	P	Q	Q	T	A	P	E	L	E	E	F	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	F	G	T	D	A	V	I	Y	L	K	A	L	S	T	D	S	V	E	R	L	P
Template Known Secondary structure		T											S	S	T	T	T		B
Template Predicted Secondary structure
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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