Job Description P21865 Confidence 99.87% Date Thu Jan 5 11:38:35 GMT 2012 Rank 8 Aligned Residues 241 % Identity 15% Template c1y8oA_ PDB info PDB header:transferase Chain: A: PDB Molecule:[pyruvate dehydrogenase [lipoamide]] kinase isozyme 3; PDBTitle: crystal structure of the pdk3-l2 complex Resolution 2.48 Å

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		644	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.							.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.
Query Sequence		R	L	T	L	T	A	S	E	E	Q	A	R	M	A	S	E	R	E	Q	I	R	N	A	L	L	A	A	L	S	H	D	L	R	T	P	L	T	V	L	F	G	Q	A	E	I	L	T	L	.	.	.	.	.	.	D	L	A	S	E	G	S	P	H	A	R	Q	A	S	E	I	R	Q	H	V	L	N	T	T	R	L
Query Conservation																																																		.	.	.	.	.	.
Alig confidence																																																		.	.	.	.	.	.
Template Conservation
Template Sequence		M	Q	S	F	L	E	L	L	E	Y	E	N	K	S	P	E	D	P	Q	V	L	D	N	F	L	Q	V	L	I	K	V	R	N	R	H	N	D	V	V	P	T	M	A	Q	G	V	I	E	Y	K	E	K	F	G	F	D	P	F	I	S	T	N	I	Q	Y	F	L	D	R	F	Y	T	N	R	I	S	F	R	M	L
Template Known Secondary structure										G	G	G	G			T	T																			G	G	G
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		718	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.						.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.												760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.
Predicted Secondary structure																					.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	N	N	L	L	D	M	A	R	I	Q	S	G	G	F	N	L	K	K	.	.	.	.	.	E	W	L	T	L	E	E	V	V	G	S	A	L	Q	M	L	E	P	G	L	S	S	P	.	.	.	.	.	.	.	.	.	.	.	I	N	L	S	L	P	E	P	L	T	L	I	H	V	D	G	P	L	F	E	R	V
Query Conservation																					.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	N	Q	H	T	L	L	F	G	G	D	T	N	P	V	H	P	K	H	I	G	S	I	D	P	T	C	N	V	A	D	V	V	K	D	A	Y	E	T	A	K	M	L	C	E	Q	Y	Y	L	V	A	P	E	L	E	V	E	E	F	N	A	K	A	P	D	K	P	I	Q	V	V	Y	V	P	S	H	L	F	H	M
Template Known Secondary structure										S			S	S		S	S	T	T	S	B	T	T	B																										S												T	T	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		782	.	.	.	.	.	.	.	790	.	.	.									.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.
Query Sequence		L	I	N	L	L	E	N	A	V	K	Y	A	.	.	.	.	.	.	.	.	G	A	Q	A	E	I	G	I	D	A	H	V	E	G	E	N	L	Q	L	D	V	W	D	N	G	P	G	L	P	P	G	Q	E	Q	T	I	F	D	K	F	A	R	G	N	K	E	S	A	V	P	G	V	G	L	G	L	A	I	C	R
Query Conservation														.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.
Template Sequence		L	F	E	L	F	K	N	S	M	R	A	T	V	E	L	Y	E	D	R	K	E	G	Y	P	A	V	K	T	L	V	T	L	G	K	E	D	L	S	I	K	I	S	D	L	G	G	G	V	P	L	R	K	I	D	R	L	F	N	Y	M	Y	S	P	.	.	.	.	.	.	.	L	F	G	Y	G	L	P	I	S	R
Template Known Secondary structure																		T	T		S	S													S	S										S									G	G	G	G		T	T	T			.	.	.	.	.	.	.			T	T
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.								.	.	310	.	.	.	.	.	.	.
		854	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	V	D	V	H	G	G	T	I	T	A	F	N	R	P	E	G	G	A	C	F	R	V	T	L	P	Q	Q	T	A	P	E	L	E	E	F	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Y	A	R	Y	F	Q	G	D	L	K	L	Y	S	M	E	G	V	G	T	D	A	V	I	Y	L	K	A	L	S	S	E	S	F	E	R	L	P
Template Known Secondary structure							T	T									T	T	T										S		G	G	G		B
Template Predicted Secondary structure
Template SS confidence
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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