Job Description P21865 Confidence 82.63% Date Thu Jan 5 11:38:35 GMT 2012 Rank 221 Aligned Residues 96 % Identity 13% Template c1u3cA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:cryptochrome 1 apoprotein; PDBTitle: crystal structure of the phr domain of cryptochrome 1 from2 arabidopsis thaliana Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.								.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure																									.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.
Query Sequence		S	V	W	H	A	V	Y	V	E	T	P	A	L	H	R	L	P	E	K	K	R	R	A	.	.	.	.	.	.	.	I	L	S	A	L	R	L	A	Q	E	L	G	A	E	T	A	T	L	S	D	P	A	E	E	K	A	V	V	R	Y	A	R	E	H	N	L	G	K	I	I	L	G	R	P	A	S	R	R	W	W
Query Conservation																									.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	P	V	I	A	L	F	V	W	A	P	E	E	E	G	H	Y	H	P	G	R	V	S	R	W	W	L	K	N	S	L	A	Q	L	D	S	S	L	R	S	L	G	T	C	L	I	T	K	R	S	T	D	S	V	A	S	L	L	D	V	V	K	S	T	G	A	S	Q	I	F	F	N	H	L	Y	D	P	L	S	L
Template Known Secondary structure		S										G	G	G	G	T	T																									T	T									S														T											S
Template Predicted Secondary structure
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	E	T	F	A	D	R	L	A	R	I	A	P	D	L	D	Q	V	L	V	A	L	D
Query Conservation
Alig confidence														.
Template Conservation														.
Template Sequence		V	R	D	H	R	A	K	D	V	L	T	A	.	Q	G	I	A	V	R	S	F	N	A	D
Template Known Secondary structure													T	.	T	T									S
Template Predicted Secondary structure														.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions