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Job Description | P21865 | Confidence | 71.99% | Date | Thu Jan 5 11:38:35 GMT 2012 |
Rank | 303 | Aligned Residues | 105 |
% Identity | 11% | Template | c1tezB_ |
PDB info |
PDB header:lyase/dna | Chain: B: PDB Molecule:deoxyribodipyrimidine photolyase; |
PDBTitle: complex between dna and the dna photolyase from anacystis nidulans
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Resolution | 1.80 Å |
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269 | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | |
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Predicted Secondary structure |   |
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Query Sequence |   |
A | A | A | R | L | A | S | R | L | G | S | V | W | H | A | V | Y | V | E | T | P | A | L | . |
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H | R | L | P | E | K | K | R | R | A | I | L | S | A | L | R | . |
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G | A | E | T | A | T | L | S | D | P | A | E | E | K | A | V | V | R | Y | A | R | E | H | N | L | G | K | I | I |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
I | G | L | A | A | A | R | A | Q | S | A | Q | L | I | G | L | F | C | L | D | P | Q | I | L | Q | S | A | D | M | A | P | A | R | V | A | Y | L | Q | G | C | L | Q | E | L | Q | Q | R | Y | Q | Q | A | G | S | R | L | L | L | L | Q | G | . |
D | P | Q | H | L | I | P | Q | L | A | Q | Q | L | Q | A | E | A | V | Y |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | |
. | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
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342 | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | G | R | P | A | S | R | R | W | W | R | R | E | T | F | A | D | R | L | A | R | I | A | P | D | L | D | Q | V | L | V | A | L | D |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
W | N | Q | D | I | E | P | Y | G | R | D | R | D | G | Q | V | A | A | A | L | K | T | A | . |
G | I | R | A | V | Q | L | W | D | Q |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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98 | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | |
. | . | . | . | . | . | . | . | . | 130 |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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