Job Description P21865 Confidence 96.23% Date Thu Jan 5 11:38:35 GMT 2012 Rank 101 Aligned Residues 76 % Identity 21% Template c1qzrA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:dna topoisomerase ii; PDBTitle: crystal structure of the atpase region of saccharomyces cerevisiae2 topoisomerase ii bound to icrf-187 (dexrazoxane) Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		778	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.				.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.									.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.
Predicted Secondary structure																					.	.	.																													.	.	.	.	.	.	.	.																			.	.	.	.
Query SS confidence																					.	.	.																													.	.	.	.	.	.	.	.																			.	.	.	.
Query Sequence		F	E	R	V	L	I	N	L	L	E	N	A	V	K	Y	A	G	A	Q	.	.	.	A	E	I	G	I	D	A	H	V	E	G	E	N	L	Q	L	D	V	W	D	N	G	P	G	L	P	P	G	.	.	.	.	.	.	.	.	Q	E	Q	T	I	F	D	K	F	A	R	G	N	K	E	S	A	V	.	.	.	.
Query Conservation																					.	.	.																													.	.	.	.	.	.	.	.																			.	.	.	.
Alig confidence																					.	.	.														.	.														.	.	.	.	.	.	.	.																			.	.	.	.
Template Conservation																																					.	.
Template Sequence		L	F	K	I	F	D	E	I	L	V	N	A	A	D	N	K	V	R	D	P	S	M	K	R	I	D	V	N	I	H	A	E	E	H	T	.	.	I	E	V	K	N	D	G	K	G	I	P	I	E	I	H	N	K	E	N	I	Y	I	P	E	M	I	F	G	H	L	L	T	S	S	N	Y	D	D	D	E	K	K	V
Template Known Secondary structure																					T	T										T	T	T	T		.	.							S	S					S	B		T	T	T		S	B								S	S	S			S				T	T	S
Template Predicted Secondary structure																																					.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
				843	.	.	.	.	.	.	850	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	P	G	V	G	L	G	L	A	I	C	R	A	I
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		T	G	G	R	N	G	Y	G	A	K	L	C	N	I	F
Template Known Secondary structure			S			S	S									T
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions