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Job DescriptionP21865
Confidence86.26%DateThu Jan 5 11:38:35 GMT 2012
Rank207Aligned Residues216
% Identity19%Templatec1qvrB_
PDB info PDB header:chaperoneChain: B: PDB Molecule:clpb protein; PDBTitle: crystal structure analysis of clpb
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20...... ...30.........40.........50........ .60.........70.........
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Query Sequence  DRLLEQTAAPHRGKLK. . . . . . . VFFGACAGVGKTWAMLAEAQRLRAQGLDIVVG. . . . VVETHGRKDTAAMLEGLAVLP
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Template Sequence  RAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAVSRL. . . . . . . . . . .
Template Known Secondary structure  GGGTS
SSS
SBSSSSSSSSGGG
TTT

SSGGGGG
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   568.570.........580.........590.........600.........610.........620.........630......
 
   80.........90.........100.........110.........120.........130....... ..140
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Query Sequence  LKRQAYRGRHISEFDLDAALARRPALILMDELAHSNAPGSRHPKRWQDIEELLEAGID. . . . . . . . . . . . . . . . . . . VFT
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Template Sequence  . . . . . . . . . . . . . QLTEAVRRRPYSVILFDEI. . . . . . . . . . EKAHPDVFNILLQILDDGRLTDSHGRTVDFRNTVIILT
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SSSSG..........GGS
TTT

SSS


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   651........660......... 670.........680.........690.........700.......
 
   141 ........150.........160.........170.........180.........190...... ...200.........210.
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Query Sequence  T. . . . . . . VNVQHLESLNDVVSGVTGIQVRETVPDPFFDAADDVVLVDLPPDDLRQRLKEGKV. . YIAGQAERAIEHFFR
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Template Sequence  SNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRPLTKEQIRQIVEIQLSYLRARLAEKRISLELT
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TTTT

TTTS
T
SB

B




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   708.710.........720.........730.........740.........750.........760.........770.........780.......
 
   212.......220... ......230.........240.........250.........260
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Query Sequence  KGNLIALRELAL. . . . . . RRTADRVDEQMRAWRGHPGEEKVWHTRDAILLCIGHN
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Template Sequence  EAAKDFLAERGYDPVFGARPLRRVIQRELETPLAQKILAGEVKEGDRVQVDVGPA
Template Known Secondary structure 
BTTTBTSTTSS
TT

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   788.790.........800.........810.........820.........830.........840..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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