Job Description P30871 Confidence 98.51% Date Thu Jan 5 11:46:46 GMT 2012 Rank 10 Aligned Residues 202 % Identity 16% Template c3g3rA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:vacuolar transporter chaperone 4; PDBTitle: crystal structure of a eukaryotic polyphosphate polymerase2 in complex with appnhp-mn2+ Resolution 2.00 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.										.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.								.	.	.	.	.	60	.					.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.								.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.								.	.	.	.
Query Sequence		I	E	L	K	F	I	V	N	H	S	A	V	E	A	L	R	D	H	L	N	T	L	G	.	.	.	.	.	.	.	.	.	G	E	H	H	D	P	V	Q	L	L	N	I	Y	Y	E	T	P	D	N	W	L	R	G	H	D	M	G	.	.	.	.	.	.	.	L	R	I	R	G	E	N	.	.	.	.	G	R	Y
Query Conservation																									.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.								.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.								.	.	.	.
Template Conservation
Template Sequence		Q	T	T	K	Y	W	V	H	P	D	N	I	T	E	L	K	L	I	I	L	K	H	L	P	V	L	V	F	N	T	N	K	E	F	E	R	E	D	S	A	I	T	S	I	Y	F	D	N	E	N	L	D	L	Y	Y	G	R	L	R	K	D	E	G	A	E	A	H	R	L	R	W	Y	G	G	M	S	T	D	T	I
Template Known Secondary structure										T	T	S										T	T			B				S	T	T	S				G	G	G	G										T	T										T		T	T										S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.																									90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	M	T	M	K	V	A	G	R	V	T	G	G	L	H	Q	R	P	E	Y	N	V	A	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	P	T	L	D	L	A	Q	L	P	T	E	V	W	P	N	G	E	L	P	A	D	L	A	S	R	V	Q	P	L	F
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.
Template Sequence		F	V	E	R	K	T	H	R	E	D	W	T	G	E	K	S	.	V	K	A	R	F	A	L	K	E	R	H	V	N	D	F	L	K	G	K	Y	T	V	D	Q	V	F	A	K	M	R	K	E	G	K	K	P	M	N	E	I	E	N	L	E	A	L	A	S	E	I	Q	Y	V	M	L	K	K	K	L	R	P	V	V
Template Known Secondary structure												T	T					.									G	G	G						T	T	S	S															S																						T	T
Template Predicted Secondary structure																		.
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.		.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.																																	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	T	D	F	Y	R	E	K	W	L	V	A	V	D	G	S	Q	I	E	I	A	L	D	Q	G	E	V	K	A	G	E	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	P	I	C	E	L	E	L	E	L	L	S	G	D	T
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.
Template Sequence		R	S	F	Y	N	R	T	A	F	Q	L	P	G	.	D	A	R	V	R	I	S	L	D	T	E	L	T	M	V	R	E	D	N	F	D	G	V	D	R	T	H	K	N	W	R	R	T	D	I	G	V	D	W	P	F	K	Q	L	D	D	K	D	I	C	R	F	P	Y	A	V	L	E	V	K	L	Q	T	Q	L	G
Template Known Secondary structure													T	T	.																				T	T	S			T	T	T	T	S	S	S		S	S			S		T	T		T	T	S		G	G	G					S	S											T	T
Template Predicted Secondary structure															.
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.		.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		R	A	V	L	K	L	A	N	Q	L	V	S	Q	T	G	L	R	Q	G	.	S	L	S	K	A	A	R	G	Y	H	L	A	Q	G	N	P	A	R	E	I	K
Query Conservation																					.
Alig confidence																					.
Template Conservation
Template Sequence		Q	E	P	P	E	W	V	R	E	L	V	G	S	H	L	V	E	P	V	P	K	F	S	K	F	I	H	G	V	A	T	L	L	N	D	K	V	D	S	I	P
Template Known Secondary structure														S	T	T					T	T												T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		435	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions