 |
Job Description | P21418 | Confidence | 4.48% | Date | Wed Jan 25 15:20:41 GMT 2012 |
Rank | 77 | Aligned Residues | 45 |
% Identity | 24% | Template | c2iu9C_ |
PDB info |
PDB header:transferase | Chain: C: PDB Molecule:udp-3-o-[3-hydroxymyristoyl] glucosamine |
PDBTitle: chlamydia trachomatis lpxd with 100mm udpglcnac (complex ii)
|
Resolution | 3.1 Å |
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | P | V | I | I | A | P | D | Y | T | D | D | E | L | Y | E | W | M | R | Q | K | I | N | A | A | Q | D | L | K | W | A | N | E | A | R | A | K | Q | A | E | N | L | S | A | L | E | Q | D | I | T | N | L | E |
Query Conservation |   |
|
|   |
|
|
|
|   |
|
|   |   |
|
|
|
|
|
|   |   |
|
|   |
|   |   |   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |
|   |
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |
|   |
|
|   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |
| . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |
Template Sequence |   |
T | S | P | G | I | Y | G | G | A | P | A | R | P | Y | Q | E | I | H | R | Q | . |
V | A | K | V | R | N | L | . |
. |
. |
. |
. |
. |
. |
P | R | L | E | E | R | I | A | A | L | E | K | L | V | Q | K | L | E |
Template Known Secondary structure |   |
| S |
|  |  |  |  | T | T | T | T |  |  |  |  |  |  |  |  |  | . |  |  |  |  | T | T |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  | T | T | T | T |
|
|
|
|
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
304 | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | |
. | . | . | . | . | . | 330 | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|