 |
Job Description | P0ABJ6 | Confidence | 5.18% | Date | Thu Jan 5 11:15:38 GMT 2012 |
Rank | 16 | Aligned Residues | 29 |
% Identity | 31% | Template | c3ajfA_ |
PDB info |
PDB header:viral protein | Chain: A: PDB Molecule:non-structural protein 3; |
PDBTitle: structural insigths into dsrna binding and rna silencing suppression2 by ns3 protein of rice hoja blanca tenuivirus
|
Resolution | 2.00 Å |
|
  |   |
63 | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | C | F | L | H | M | N | T | K | S | D | E | G | W | N | M | T | A | F | V | F | T | V | L | I | I | A | I | L | V | V | G | S | I | W | I | M | W | N |
Query Conservation |   |
  |   |
|
|
|
|   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|   |   |   |
|   |   |
|
|
|   |
|
|
|
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |   |
|   |
|
|
|
|   |
|   |
|
|   |
|
|
|
|   | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
Template Sequence |   |
H | X | F | L | Q | X | I | R | K | P | D | D | P | E | N | L | S | V | F | L | K | S | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | W | X | L | S | H |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
57 | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
80 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|