Job Description P0ABJ6 Confidence 4.19% Date Thu Jan 5 11:15:38 GMT 2012 Rank 21 Aligned Residues 52 % Identity 12% Template c2wwbA_ PDB info PDB header:ribosome Chain: A: PDB Molecule:protein transport protein sec61 subunit alpha isoform 1; PDBTitle: cryo-em structure of the mammalian sec61 complex bound to the2 actively translating wheat germ 80s ribosome Resolution 6.48 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	V	I	L	G	T	I	L	A	M	A	V	V	Q	V	L	V	H	L	V	C	F	L	H	M	N	T	K	S	D	E	G	W	N	M	T	A	F	V	F	T	V	L	I	I	A	I	L	V	V	G	S	I	W	I	M	W
Query Conservation
Alig confidence																																							.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.
Template Sequence		N	G	A	Q	K	L	F	G	M	I	I	T	I	G	Q	S	I	V	Y	V	M	T	G	M	Y	G	D	P	S	E	M	G	A	G	I	C	L	.	.	.	.	.	.	L	I	T	I	Q	L	F	V	A	G	L	I	V	L	L
Template Known Secondary structure																								T	S	S			S	S		S							.	.	.	.	.	.
Template Predicted Secondary structure																																							.	.	.	.	.	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.							150	.	.	.	.	.	.	.	.	.	160	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions