Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABJ6
Confidence1.96%DateThu Jan 5 11:15:38 GMT 2012
Rank66Aligned Residues43
% Identity21%Templatec2ksfA_
PDB info PDB header:transferaseChain: A: PDB Molecule:sensor protein kdpd; PDBTitle: backbone structure of the membrane domain of e. coli2 histidine kinase receptor kdpd, center for structures of3 membrane proteins (csmp) target 4312c
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.........40.........50......
Predicted Secondary structure 




Query SS confidence 










































Query Sequence  SVKTYMTGFILSIILTVIPFWMVMTGAASPAVILGTILAMAVV
Query Conservation 
 
 











 


  
             
   
 
Alig confidence 










































Template Conservation    
 
  
      

 
   
          







  
Template Sequence  QIQGSVVAAALSAVITLIAMQWLMAFDAANLVMLYLLGVVVVA
Template Known Secondary structure 
SSSSTTSS

SS
Template Predicted Secondary structure 




Template SS confidence 










































   398.400.........410.........420.........430.........440
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions