Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABJ6
Confidence14.02%DateThu Jan 5 11:15:38 GMT 2012
Rank1Aligned Residues25
% Identity16%Templatec1dxzA_
PDB info PDB header:transmembrane proteinChain: A: PDB Molecule:acetylcholine receptor protein, alpha chain; PDBTitle: m2 transmembrane segment of alpha-subunit of nicotinic2 acetylcholine receptor from torpedo californica, nmr, 203 structures
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20.........30.........40....
Predicted Secondary structure 



Query SS confidence 
























Query Sequence  TGFILSIILTVIPFWMVMTGAASPA
Query Conservation 









 


  
        
Alig confidence 
























Template Conservation 
 
 






 

 


 
  
 
Template Sequence  MTLSISVLLSLTVFLLVIVELIPST
Template Known Secondary structure  TTT
Template Predicted Secondary structure 



Template SS confidence 
























   243......250.........260.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions