Job Description P46022 Confidence 8.66% Date Thu Jan 5 12:03:55 GMT 2012 Rank 44 Aligned Residues 77 % Identity 16% Template c3nqoB_ PDB info PDB header:transcription Chain: B: PDB Molecule:marr-family transcriptional regulator; PDBTitle: crystal structure of a marr family transcriptional regulator (cd1569)2 from clostridium difficile 630 at 2.20 a resolution Resolution 2.20 Å

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		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.							.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.
Query Sequence		K	R	I	L	T	V	Y	L	N	I	A	E	F	G	D	G	V	F	G	V	E	A	A	A	Q	R	Y	F	H	K	P	A	S	K	L	T	R	S	E	A	A	L	L	A	A	V	L	P	N	P	L	R	F	K	V	S	S	P	S	G	Y	V	R	S	.	.	.	.	.	.	R	Q	A	W	I	L	R	Q	M	Y
Query Conservation																																																																		.	.	.	.	.	.
Alig confidence																.																																					.	.												.	.	.	.	.	.
Template Conservation																.																																					.	.
Template Sequence		N	E	L	K	E	L	F	L	X	N	Q	T	Y	A	.	T	L	F	T	L	T	N	K	I	Q	I	E	G	D	K	Y	F	G	I	L	T	S	R	Q	Y	X	T	I	L	S	I	L	H	L	P	E	.	.	E	E	T	T	L	N	N	I	A	R	K	X	G	T	S	K	Q	N	I	N	R	L	V	A	N	L	E
Template Known Secondary structure																.																			S	S													T	S		G	.	.	G	G											T	S
Template Predicted Secondary structure																.																																					.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		229	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	G	G	E	P	F	M	Q
Query Conservation
Alig confidence					.	.	.
Template Conservation					.	.	.
Template Sequence		K	N	G	.	.	.	Y	V	D
Template Known Secondary structure			T	T	.	.	.	S
Template Predicted Secondary structure					.	.	.
Template SS confidence
		82	.	.				.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions