Job Description P46022 Confidence 100.00% Date Thu Jan 5 12:03:55 GMT 2012 Rank 2 Aligned Residues 186 % Identity 30% Template c2olvA_ PDB info PDB header:transferase Chain: A: PDB Molecule:penicillin-binding protein 2; PDBTitle: structural insight into the transglycosylation step of bacterial cell2 wall biosynthesis : donor ligand complex Resolution 2.80 Å

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.							.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.
Query Sequence		M	V	E	R	Q	V	S	A	W	L	H	G	N	F	R	Y	V	.	.	.	.	.	.	A	H	S	D	W	V	S	M	D	Q	I	S	P	W	M	G	L	A	V	I	A	A	E	D	Q	K	F	P	E	H	W	G	F	D	V	A	S	I	E	K	A	L	A	H	N	E	R	N	E	N	R	I	R	G	A	S	T
Query Conservation																			.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.	.
Template Sequence		L	Q	D	P	I	P	A	K	I	Y	D	K	N	G	E	L	V	K	T	L	D	N	G	Q	R	H	E	H	V	N	L	K	D	V	P	K	S	X	K	D	A	V	L	A	T	E	D	N	R	F	Y	E	H	G	A	L	D	Y	K	R	L	F	G	A	I	.	.	.	.	.	.	.	.	.	G	K	G	A	S	T
Template Known Secondary structure						B							T	T	S							S	T	T		S	B					S	T	T	S														T	T		S	S		S	S	S		S								.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.										.	.	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	Q	Q	T	A	K	N	L	F	L	W	D	G	R	S	W	V	R	K	G	L	E	A	G	L	T	L	G	I	E	T	V	W	S	K	K	R	I	L	T	V	Y	L	N	I	A	E	F	G	D	G	V	F	G	V	E	A	A	A	Q	R	Y	F	H	K	P	A	S	K	L	T	R	S	E	A	A	L	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	Q	Q	V	V	K	D	A	F	L	S	Q	H	K	S	I	G	R	K	A	Q	E	A	Y	L	S	Y	R	L	E	Q	E	Y	S	K	D	D	I	F	Q	V	Y	L	N	K	I	Y	Y	S	D	G	V	T	G	I	K	A	A	A	K	Y	Y	F	N	K	D	L	K	D	L	N	L	A	E	E	A	Y	L	A
Template Known Secondary structure									T	T	T			S			T	T	T																S														B		S	T	T		B	S													S	T	T
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	L	P	N	P	L	R	F	K	V	S	S	P	S	G	Y	V	R	S	R	Q	A	W	I	L	R	Q	M	Y	Q	L	G	G	E	P	F	M	Q	Q	H	Q	L	D
Query Conservation
Alig confidence																																			.	.	.
Template Conservation																																			.	.	.
Template Sequence		G	L	P	Q	V	P	N	N	Y	N	I	Y	D	H	P	K	A	A	E	D	R	K	N	T	V	L	Y	L	X	H	Y	H	K	.	.	.	R	I	T	D	K	Q	W	E
Template Known Secondary structure			G	G	G	S						T	T	T																			T	T	.	.	.	S	S
Template Predicted Secondary structure																																			.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.				.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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