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Job DescriptionP31437
Confidence10.35%DateThu Jan 5 11:47:28 GMT 2012
Rank18Aligned Residues182
% Identity11%Templated1wpga4
SCOP infoCalcium ATPase, transmembrane domain M Calcium ATPase, transmembrane domain M Calcium ATPase, transmembrane domain M
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50...... ...60.........70..
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Query Sequence  GSTRKGMLNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRLIFAGLILLTLSF. . . . . . . . . VHGDKIFSIINNHKDA
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Template Sequence  NNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLF
Template Known Secondary structure  S



S

TTTTT



SGGGGS



TT

SS
T
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   755....760.........770.........780.........790.........800.........810.........820.........830....
 
   73......80.........90........ .100.........110.........120
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Query Sequence  ISLLIFSVVGALTVQLTFLLTIEKSN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AATATVLQFLSPTIIVAWFSLV
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Template Sequence  FRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALN
Template Known Secondary structure  TTTSSSS


TTSGGGGTTTTSSSTTTT

S
GGGGG
T
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   835....840.........850.........860.........870.........880.........890.........900.........910....
 
   121.... ....130.........140.... .....150.........160.........170.........180...
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Query Sequence  RKSRP. . . . . . . . . . GILVFCAILTSLVGTFLLV. . . . THGNPTSLSISPAALFWGIASAFAAAFYTTYPSTLIARY
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Template Sequence  SLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFIARNY
Template Known Secondary structure  TS
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TTTS
GGG
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   915....920.........930.........940.........950.........960.........970.........980.........990.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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