Job Description P31437 Confidence 36.75% Date Thu Jan 5 11:47:28 GMT 2012 Rank 6 Aligned Residues 161 % Identity 12% Template c3rkoF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:nadh-quinone oxidoreductase subunit j; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution Resolution 3.00 Å

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		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	C	A	I	L	T	S	L	V	G	T	F	L	L	V	T	H	G	N	P	T	S	L	S	I	S	P	A	A	L	F	W	G	I	A	S	A	F	A	A	A	F	Y	T	T	Y	P	S	T	L	I	A	R	Y	G	T	L	P	V	V	G	W	S	M	L	I	G	G	L	I	L	L	P	F	Y	A	R	Q	G	T
Query Conservation
Alig confidence																			.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.
Template Sequence		I	C	G	L	I	A	I	L	A	T	L	R	V	I	T	H	T	.	.	.	.	.	.	N	P	V	H	A	L	L	Y	L	I	I	S	L	L	A	I	S	G	V	F	F	S	L	G	A	Y	F	A	G	A	L	E	I	I	V	Y	A	G	A	I	M	V	L	F	V	F	V	V	M	M	L	N	L	G	G	S	E
Template Known Secondary structure																			.	.	.	.	.	.	S																						T	T											T																			S	S	T	T
Template Predicted Secondary structure																			.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.							.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	F	V	V	N	G	S	L	I	L	A	F	F	Y	L	V	V	I	G	T	S	L	T	F	S	L	Y	L	K	G	A	Q	L	I	G	G	P	K	A	S	I	L	S	C	A	E	P	L	S	S	A	L	L	S	L	L	L	L	G	I	T	F	T	L	P	D	W	L	G	T	L	L	I	L	S	S	V	I	L	I
Query Conservation
Alig confidence																																											.	.	.	.
Template Conservation																																											.	.	.	.
Template Sequence		I	E	Q	E	R	Q	W	L	K	P	Q	V	W	I	G	P	A	I	L	S	A	I	M	L	V	V	I	V	Y	A	I	L	G	V	N	D	Q	G	I	D	G	.	.	.	.	T	P	I	S	A	K	A	V	G	I	T	L	F	G	P	Y	V	L	A	V	E	L	A	S	M	L	L	L	A	G	L	V	V	A	F
Template Known Secondary structure							T	T		S																							T	T	S								.	.	.	.													T	T	T	S
Template Predicted Secondary structure																																											.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.					.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		S	M	D	S	R	R	R	A	R	K	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	V	G	R	E	E	R	A	G	E	V
Template Known Secondary structure										S	S
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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