Job Description P31437 Confidence 2.65% Date Thu Jan 5 11:47:28 GMT 2012 Rank 47 Aligned Residues 230 % Identity 12% Template c3hd6A_ PDB info PDB header:membrane protein, transport protein Chain: A: PDB Molecule:ammonium transporter rh type c; PDBTitle: crystal structure of the human rhesus glycoprotein rhcg Resolution 2.10 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	L	I	A	A	V	L	W	G	S	S	G	V	C	A	Q	Y	I	M	E	Q	S	Q	M	S	S	Q	F	L	T	M	T	R	L	I	F	A	G	L	I	L	L	T	L	S	F	V	H	G	D	K	I	F	S	I	I	N	N	H	K	D	A	I	S	L	L	I	F	S	V	V	G	A	L	T	V	Q	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	I	M	T	F	F	Q	V	T	L	F	A	V	N	E	F	I	L	L	N	L	L	K	V	K	D	A	G	G	S	M	T	I	H	T	F	G	A	Y	F	G	L	T	V	T	R	I	L	Y	R	R	N	L	E	Q	S	K	E	R	Q	N	S	V	Y	Q	S	D	L	F	A	M	I	G	T	L	F	L	W	M
Template Known Secondary structure																						T	T	S					T	T		T	T	T	T															T			T	T	G	G	G	G	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		90	.	.	.	.	.	.	.	.											.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.																																													.
Query SS confidence											.	.	.	.	.	.	.	.	.	.																																													.
Query Sequence		F	L	L	T	I	E	K	S	N	.	.	.	.	.	.	.	.	.	.	A	A	T	A	T	V	L	Q	F	L	S	P	T	I	I	V	A	W	F	S	L	V	R	K	S	R	P	G	I	L	V	F	C	A	I	L	T	S	L	V	G	T	F	L	.	L	V	T	H	G	N	P	T	S	L	S	I	S	P	A	A
Query Conservation											.	.	.	.	.	.	.	.	.	.																																													.
Alig confidence											.	.	.	.	.	.	.	.	.	.																																													.
Template Conservation
Template Sequence		Y	W	P	S	F	N	S	A	I	S	Y	H	G	D	S	Q	H	R	A	A	I	N	T	Y	C	S	L	A	A	C	V	L	T	S	V	A	I	S	S	A	L	H	K	K	G	K	L	D	M	V	H	I	Q	N	A	T	L	A	G	G	V	A	V	G	T	A	A	E	M	M	L	M	P	Y	G	A	L	I	I	G
Template Known Secondary structure							T	T	T	T		S	S																													T	S	T	T											G	G	G						T	T	T	T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.				190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																	.	.	.
Query SS confidence																																	.	.	.
Query Sequence		L	F	W	G	I	A	S	A	F	A	A	A	F	Y	T	T	Y	P	S	T	L	I	A	R	Y	G	T	L	P	V	V	.	.	.	G	W	S	M	L	I	G	G	L	I	L	L	P	F	Y	A	R	Q	G	T	N	F	V	V	N	G	S	L	I	L	A	F	F	Y	L	V	V	I	G	T	S	L	T	F	S	L
Query Conservation																																	.	.	.
Alig confidence																																	.	.	.
Template Conservation
Template Sequence		F	V	C	G	I	I	S	T	L	G	F	V	Y	L	T	P	F	L	E	S	R	L	H	I	Q	D	T	C	G	I	N	N	L	H	G	I	P	G	I	I	G	G	I	V	G	A	V	T	A	A	S	D	W	T	A	R	T	Q	G	K	F	Q	I	Y	G	L	L	V	T	L	A	M	A	L	M	G	G	I	I	V
Template Known Secondary structure																												T	T						T
Template Predicted Secondary structure
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
		236	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	K	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	I	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		413	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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