Job Description P31437 Confidence 46.67% Date Thu Jan 5 11:47:28 GMT 2012 Rank 4 Aligned Residues 224 % Identity 12% Template c3b9yA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:ammonium transporter family rh-like protein; PDBTitle: crystal structure of the nitrosomonas europaea rh protein Resolution 1.85 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.								.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.																		.
Query SS confidence																									.	.	.	.	.	.	.																		.
Query Sequence		L	I	A	A	V	L	W	G	S	S	G	V	C	A	Q	Y	I	M	E	Q	S	Q	M	.	.	.	.	.	.	.	S	S	Q	F	L	T	M	T	R	L	I	F	A	G	L	I	L	.	L	T	L	S	F	V	H	G	D	K	I	F	S	I	I	N	N	H	K	D	A	I	S	L	L	I	F	S	V	V	G	A
Query Conservation																									.	.	.	.	.	.	.																		.
Alig confidence																									.	.	.	.	.	.	.																		.
Template Conservation
Template Sequence		A	L	L	A	L	F	I	V	P	V	Y	L	L	N	E	W	L	V	L	D	N	A	S	G	L	T	E	G	F	Q	D	S	A	G	S	I	A	I	H	A	F	G	A	Y	F	G	L	G	V	S	I	A	L	T	T	A	A	Q	R	A	Q	P	I	E	S	D	A	T	S	D	R	F	S	M	L	G	S	M	V	L
Template Known Secondary structure																				T	T		T	T	S	S		T	T				T	T		T	T	T	T																						T	S
Template Predicted Secondary structure
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.						.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.
Query SS confidence																									.	.	.	.	.
Query Sequence		L	T	V	Q	L	T	F	L	L	T	I	E	K	S	N	A	A	T	A	T	V	L	Q	.	.	.	.	.	F	L	S	P	T	I	I	V	A	W	F	S	L	V	R	K	S	R	P	G	I	L	V	F	C	A	I	L	T	S	L	V	G	T	F	L	L	V	T	H	G	N	P	T	S	L	S	I	S	P	A	A
Query Conservation																									.	.	.	.	.
Alig confidence																									.	.	.	.	.																																	.
Template Conservation																																																														.
Template Sequence		W	L	F	W	P	S	F	A	T	A	I	V	P	F	E	Q	M	P	Q	T	I	V	N	T	L	L	A	L	C	G	A	T	L	A	T	Y	F	L	S	A	L	F	H	K	G	K	A	S	I	V	D	M	A	N	A	A	L	A	G	G	.	V	A	I	G	S	V	C	N	I	V	G	P	V	G	A	F	V	I	G
Template Known Secondary structure											T	T	S		G	G	G																											T	T	T											T	T				.				T	T	T	T	T	T	S
Template Predicted Secondary structure																																																														.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	W	G	I	A	S	A	F	A	A	A	F	Y	T	T	Y	P	S	T	L	I	A	R	Y	G	T	L	P	V	V	G	W	S	M	L	I	G	G	L	I	L	L	P	F	Y	A	R	Q	G	T	N	F	V	V	N	G	S	L	I	L	A	F	F	Y	L	V	V	I	G	T	S	L	T	F	S	L	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	G	G	A	I	S	V	V	G	F	V	F	I	Q	P	M	L	E	S	K	A	K	T	I	D	T	C	G	V	H	N	L	H	G	L	P	G	L	L	G	G	F	S	A	I	L	I	V	P	G	I	A	V	A	Q	L	T	G	I	G	I	T	L	A	L	A	L	I	G	G	V	I	A	G	A	L	I
Template Known Secondary structure														T									S					T	T						T	T														S	T	T
Template Predicted Secondary structure
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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