|   |
35 | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | S | L | G | L | I | S | A | D | S | D | D | V | T | Y | I | A | A | D | E | A | T | K | Q | A | M | V | E | V | V | Y | G | R | S | L | Y | A | G | A | A | H | G | P | S | P | T | A | G | E | V | L | I | M | L | G | G | P | N | P | A | E | V | R | A | G | L | D | A | M | I | A | H | I | E | N | G | A | A | F | Q |
Query Conservation |   |
  |
|
|
|
|   |
|   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |
|   |   |   |
|
|   |
|   |   |
|   |
|
|   |
|   |   |   |   |   |
|   |   |
|   |
|   |   |
|
|
|   |   |   |
|
|
|
|
|
|   |
|
|
|   |
|   |   |   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |
|
|   |   |   |   |   |   |
|
|   |
|
|
|   |
|
|
|
|
|   |
|   |
|
|   |   |   |   |   |   |   |
|   | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |
|   |
|
|
|
|
|
|   |
|
|
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |
Template Sequence |   |
S | A | V | G | S | I | E | T | I | G | F | P | G | I | L | A | A | A | D | A | M | V | K | A | G | R | I | T | I | V | G | Y | I | R | A | G | S | A | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
F | T | L | N | I | R | G | D | V | Q | E | V | K | T | A | M | A | A | G | I | D | A | I | N | R | T | E | G | A | D |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |
|  |  |  |  |  |  |  |  |  | T | T |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S | T | T |
|
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
  |
  |   |
115 | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
W | A | N | D | A | Q | D | T | A | F | L | A | H | V | V | S | R | T | G | S | Y | L | S | S | T | A | G | I | T | L | G | D |
Query Conservation |   |
  |   |   |   |   |
|   |   |   |   |
|   |   |   |   |
|
|   |
|   |
|
|   |
|   |   |
|   |   |   |
|   |
Alig confidence |   |
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
| . | . | . | . | . | . | . | . |   |   |   |
|
|
|   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |
Template Sequence |   |
V | K | . |
. |
. |
. |
. |
. |
. |
. |
T | W | V | I | I | P | R | P | H | E | N | V | V | A | V | L | P | I | D | F | S | P |
Template Known Secondary structure |   |
 |  | . | . | . | . | . | . | . | . |  |  |  |  |  | S | S |
|
|  |  |  |  |  |  | S | S |
| S |
|
| G |
Template Predicted Secondary structure |   |
 |  | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
74 | . | |
|
|
|
|
|
|
|
. | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
  |