Job Description P76541 Confidence 100.00% Date Thu Jan 5 12:24:13 GMT 2012 Rank 2 Aligned Residues 201 % Identity 27% Template c3io0A_ PDB info PDB header:structural protein Chain: A: PDB Molecule:etub protein; PDBTitle: crystal structure of etub from clostridium kluyveri Resolution 3.00 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		T	A	M	R	V	I	A	S	V	N	A	D	F	A	R	E	L	K	L	P	P	H	I	R	S	L	G	L	I	S	A	D	S	D	D	V	T	Y	I	.	A	A	D	E	A	T	K	Q	A	M	V	E	V	V	Y	G	R	S	L	Y	A	G	A	A	H	G	P	S	P	T	A	G	E	V	L	I	M	L	G	G
Query Conservation																																									.
Alig confidence																																									.																			.	.	.	.
Template Conservation																																																												.	.	.	.
Template Sequence		T	V	G	L	V	I	A	N	V	D	S	L	L	H	K	H	L	G	L	D	N	T	C	R	S	I	G	I	I	S	A	R	V	G	A	P	A	Q	M	M	A	A	D	E	A	V	K	G	T	N	T	E	V	A	T	I	E	L	.	.	.	.	P	R	D	T	K	G	G	A	G	H	G	I	F	I	V	L	K	A
Template Known Secondary structure								S	S			G	G	G	T	T	T	T	T		B	T	T	B									S	S		S													T	S	S									.	.	.	.		S		S	S	S	S	S	S
Template Predicted Secondary structure																																																												.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.					.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		P	N	P	A	E	V	R	A	G	L	D	A	M	I	A	H	I	E	N	G	A	A	F	Q	W	A	N	D	A	Q	D	T	A	F	L	A	H	V	V	S	R	T	G	S	Y	L	S	S	T	A	G	I	T	L	G	D	P	M	A	Y	L	V	A	P	P	L	E	A	T	Y	.	G	I	D	A	A	L	K	S	A
Query Conservation																																																																								.
Alig confidence																																				.	.																																			.
Template Conservation																																				.	.
Template Sequence		A	D	V	S	D	A	R	R	A	V	E	I	A	L	K	Q	T	D	K	Y	L	G	N	V	Y	L	C	D	A	G	H	L	E	V	.	.	Q	Y	T	A	R	A	S	L	I	F	E	K	A	F	G	A	P	S	G	Q	A	F	G	I	M	H	A	A	P	A	G	V	G	M	I	V	A	D	T	A	L	K	T	A
Template Known Secondary structure		S	S																				T	T					T	T						.	.				S	S													T	T	S									S															S
Template Predicted Secondary structure																																				.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.			.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		170	.	.	.	.	.	.	.	.	.					180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.
Query SS confidence												.	.	.	.
Query Sequence		D	V	Q	L	A	T	Y	V	P	P	.	.	.	.	P	S	E	T	N	Y	S	A	A	F	L	T	G	S	Q	A	A	C	K	A	A	C	N	A	F	T	D	A	V	L	E	I	A	R	N	P	I	Q	R
Query Conservation												.	.	.	.
Alig confidence												.	.	.	.
Template Conservation
Template Sequence		D	V	K	L	I	T	Y	G	S	P	T	N	G	V	L	S	Y	T	N	E	I	L	I	T	I	S	G	D	S	G	A	V	L	Q	S	L	T	A	A	R	K	A	G	L	S	I	L	R	S	M	G	Q	D
Template Known Secondary structure											S	S	S	S	S	S	S	S		S																															T	T
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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