Job Description P76541 Confidence 98.87% Date Thu Jan 5 12:24:13 GMT 2012 Rank 12 Aligned Residues 166 % Identity 18% Template c3f56F_ PDB info PDB header:structural protein Chain: F: PDB Molecule:csos1d; PDBTitle: the structure of a previously undetected carboxysome shell2 protein: csos1d from prochlorococcus marinus med4 Resolution 2.30 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.
Query SS confidence																																			.	.
Query Sequence		L	P	P	H	I	R	S	L	G	L	I	S	A	D	S	D	D	V	T	Y	I	A	A	D	E	A	T	K	Q	A	M	V	E	.	.	V	V	Y	G	R	S	L	Y	A	G	A	A	H	G	P	S	P	T	A	G	E	V	L	I	M	L	G	G	P	N	P	A	E	V	R	A	G	L	D	A	M	I	A	H	I
Query Conservation																																			.	.
Alig confidence																																			.	.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	P	I	P	G	D	S	C	L	W	X	E	V	S	P	G	X	A	V	H	R	V	T	D	I	A	L	K	A	S	N	V	R	L	G	Q	X	I	V	E	R	A	F	G	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	A	L	Y	H	K	D	Q	S	T	V	L	H	S	G	D	V	V	L	D	A	I
Template Known Secondary structure					T	T										S	G	G	G												S	S										S	S			.	.	.	.	.	.	.	.	.	.	.	.	.							S																T
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.														.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.					.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																																	.	.	.	.																				.
Query SS confidence																																	.	.	.	.																				.
Query Sequence		E	N	G	A	A	F	Q	W	A	N	D	A	Q	D	T	A	F	L	A	H	V	V	S	R	T	G	S	Y	L	S	S	.	.	.	.	T	A	G	I	T	L	G	D	P	M	A	Y	L	V	A	P	P	L	E	.	A	T	Y	G	I	D	A	A	L	K	S	A	D	V	Q	L	A	T	Y	V	P	P	P	S	E
Query Conservation																																	.	.	.	.																				.
Alig confidence																																	.	.	.	.																				.																					.	.	.
Template Conservation																																																																													.	.	.
Template Sequence		G	S	E	V	R	K	R	T	K	P	S	T	S	W	T	E	V	I	C	A	I	T	P	D	H	A	V	L	I	N	R	Q	N	R	S	G	S	X	I	Q	S	G	X	S	X	F	I	L	E	T	E	P	A	G	Y	V	L	K	A	A	N	E	A	E	K	S	A	N	I	T	I	I	D	V	K	.	.	.	A	V
Template Known Secondary structure		T			G	G	G	S													S												S	S			S					T	T										S	S	T	T												S									.	.	.		S
Template Predicted Secondary structure																																																																													.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.				.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	Y	S	A	A	F	L	T	G	S	Q	A	A	C	K	A	A	C	N	A	F	T	D	A	V	L	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A	F	G	R	L	T	L	A	G	K	E	G	D	V	E	E	A	A	A	A	A	I	R	A	I	D	Q	I
Template Known Secondary structure		S	S	S
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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