Job Description P76541 Confidence 7.75% Date Thu Jan 5 12:24:13 GMT 2012 Rank 39 Aligned Residues 123 % Identity 10% Template c2jvzA_ PDB info PDB header:splicing Chain: A: PDB Molecule:far upstream element-binding protein 2; PDBTitle: solution nmr structure of the second and third kh domains2 of ksrp Resolution UNK

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		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	G	P	S	P	T	A	G	E	V	L	I	M	L	G	G	P	N	P	A	E	V	R	A	G	L	D	A	M	I	A	H	I	E	N	G	A	A	F	Q	W	A	N	D	A	Q	D	T	A	F	L	A	H	V	V	S	R	T	G	S	Y	L	S	S	T	A	G	I	T	L	G	D	P	M	A	Y	L	V	A	P
Query Conservation
Alig confidence																																																														.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	D	G	S	Q	N	T	N	V	D	K	P	L	R	I	I	G	D	P	Y	K	V	Q	Q	A	C	E	M	V	M	D	I	L	R	E	R	D	Q	G	G	F	G	D	R	N	E	Y	G	S	R	I	G	G	G	I	D	V	P	V	P	.	.	.	.	.	.	.	.	.	.	R	H	S	V	G	V	V	I	G	R
Template Known Secondary structure				T	T	S	S	S	S	S																								T	T		S	S	S				S	S		S	S		T	T	S		S	S	S	B						.	.	.	.	.	.	.	.	.	.	T	T	T							S
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.											.	100	.	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	E	A	T	Y	G	I	D	A	A	L	K	S	A	D	V	Q	L	A	T	Y	V	P	P	P	S	E	T	N	Y	S	A	A	F	L	T	G	S	Q	A	A	C	K	A	A	C	N	A	F	T	D	A	V	L	E	I
Query Conservation
Alig confidence							.	.	.												.
Template Conservation							.	.	.												.
Template Sequence		S	G	E	M	I	.	.	.	K	K	I	Q	N	D	A	G	V	R	I	.	Q	F	K	Q	D	D	G	T	G	P	E	K	I	A	H	I	M	G	P	P	D	R	C	E	H	A	A	R	I	I	N	D	L	L	Q	S	L
Template Known Secondary structure		S	S				.	.	.							T					.							T	T	S	S								S
Template Predicted Secondary structure							.	.	.												.
Template SS confidence
		109	110	.	.	.				.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions