Job Description P76541 Confidence 4.92% Date Thu Jan 5 12:24:13 GMT 2012 Rank 56 Aligned Residues 45 % Identity 24% Template c2cy7A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:cysteine protease apg4b; PDBTitle: the crystal structure of human atg4b Resolution 1.90 Å

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		6	.	.	.	10	.	.	.	.	.	.				.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50
Predicted Secondary structure													.	.	.																				.
Query SS confidence													.	.	.																				.
Query Sequence		L	I	R	P	S	V	T	A	M	R	V	.	.	.	I	A	S	V	N	A	D	F	A	R	E	L	K	L	P	P	H	I	R	.	S	L	G	L	I	S	A	D	S	D	D	V	T	Y	I
Query Conservation													.	.	.																				.
Alig confidence													.	.	.																				.
Template Conservation
Template Sequence		P	W	R	P	L	V	L	L	I	P	L	R	L	G	L	T	D	I	N	E	A	Y	V	E	T	L	K	H	C	F	M	M	P	Q	S	L	G	V	I	G	G	K	P	N	S	A	H	Y	F
Template Known Secondary structure			B													S	S	S			G	G	G								T	S	S	T	T								S	T	T
Template Predicted Secondary structure
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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