Return to main results Retrieve Phyre Job Id

Job DescriptionP39199
Confidence49.36%DateThu Jan 5 11:58:28 GMT 2012
Rank455Aligned Residues104
% Identity14%Templated1uxja1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains LDH N-terminal domain-like
Resolution1.75

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   134.....140.........150....... ..160.........170......... 180.........190.........200.........210
Predicted Secondary structure 









.


..





















Query SS confidence 























.





















. .






























Query Sequence  QHILDMCTGSGCIAIACAYAFPDA. EVDAVDISPDALAVAEQNIEEH. . GLIHNVIPIRSDLFRDLPKVQYDLIVTNPPY
Query Conservation   





 


 
 
 

   
  . 
 
 


  

  
  
    ..

  

     
          
 

 



Alig confidence 























.





















..






























Template Conservation 








 

   
  

  
   
 
 
                         
  
 
  
   




       
Template Sequence  KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYADTANSDVIVVTSGAPL
Template Known Secondary structure 


ST
S
SSSSTTT



S
GGGGTT
S

S


Template Predicted Secondary structure 


























Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   211........220.........230.........240.........250.........260
Predicted Secondary structure 
















Query SS confidence 

















































Query Sequence  VDAEDMSDLPNEYRHEPELGLASGTDGLKLTRRILGNAADYLADDGVLIC
Query Conservation 
       
      

  

 

  

     

      
 


 
 
Alig confidence 



.......................






















Template Conservation      .......................          
        

  
Template Sequence  IKVN. . . . . . . . . . . . . . . . . . . . . . . ADITRACISQAAPLSPNAVIIMV
Template Known Secondary structure  .......................GGG
TT

Template Predicted Secondary structure 



.......................



Template SS confidence 

















































   92... ....100.........110........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions