Job Description P39199 Confidence 99.41% Date Thu Jan 5 11:58:28 GMT 2012 Rank 238 Aligned Residues 151 % Identity 16% Template c3s1sA_ PDB info PDB header:hydrolase, transferase Chain: A: PDB Molecule:restriction endonuclease bpusi; PDBTitle: characterization and crystal structure of the type iig restriction2 endonuclease bpusi Resolution 2.35 Å

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		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.				.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																								.	.																									.	.	.																													.
Query SS confidence																								.	.																									.	.	.																													.
Query Sequence		V	L	V	P	R	S	P	I	G	E	L	I	N	N	K	F	A	G	L	I	S	K	.	.	Q	P	Q	H	I	L	D	M	C	T	G	S	G	C	I	A	I	A	C	A	Y	A	F	P	.	.	.	D	A	E	V	D	A	V	D	I	S	P	D	A	L	A	V	A	E	Q	N	I	E	E	H	G	L	I	H	.
Query Conservation																								.	.																									.	.	.																													.
Alig confidence																								.	.																									.	.	.																													.
Template Conservation
Template Sequence		V	P	T	D	I	E	L	G	K	V	L	S	I	I	S	Q	H	I	L	G	R	P	L	T	E	D	E	V	I	S	D	P	A	A	G	S	G	N	L	L	A	T	V	S	A	G	F	N	N	V	X	P	R	Q	I	W	A	N	D	I	E	T	L	F	L	E	L	L	S	I	R	L	G	L	L	F	P	Q	L	V
Template Known Secondary structure		S	S																			S				T	T						T	T		T	T	S									T	S	T	T			G	G	G						S		G	G	G										T	T	S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
								184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.	.	230	.	.	.	.	.				.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																																										.												.	.	.
Query SS confidence		.	.	.	.	.	.																																										.												.	.	.
Query Sequence		.	.	.	.	.	.	N	V	I	P	I	R	S	D	L	F	R	D	L	P	K	V	Q	Y	D	L	I	V	T	N	P	P	Y	V	D	A	E	D	M	S	D	L	P	N	E	Y	R	.	H	E	P	E	L	G	L	A	S	G	T	.	.	.	D	G	L	K	L	T	R	R	I	L	G	N	A	A	D	Y	L	A
Query Conservation		.	.	.	.	.	.																																										.												.	.	.
Alig confidence		.	.	.	.	.	.																																										.												.	.	.
Template Conservation
Template Sequence		S	S	N	N	A	P	T	I	T	G	E	D	V	C	S	L	N	P	E	D	F	A	N	V	S	V	V	V	X	N	P	P	Y	V	S	G	V	T	D	P	A	I	K	R	K	F	A	H	K	I	I	Q	L	T	G	N	R	P	Q	T	L	F	G	Q	I	G	V	E	A	L	F	L	E	L	V	T	E	L	V	Q
Template Known Secondary structure		B	T	T	B									G	G	G			G	G	G	G	T	T									B			S	S																			S	S			S	S		S	S	S															S
Template Predicted Secondary structure
Template SS confidence
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
		254	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	G	V	L	I	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G	T	V	I	S	A
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		457	.	.	460	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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