 |
Job Description | P39199 | Confidence | 70.99% | Date | Thu Jan 5 11:58:28 GMT 2012 |
Rank | 390 | Aligned Residues | 62 |
% Identity | 16% | Template | c3rkuC_ |
PDB info |
PDB header:oxidoreductase | Chain: C: PDB Molecule:oxidoreductase ymr226c; |
PDBTitle: substrate fingerprint and the structure of nadp+ dependent serine2 dehydrogenase from saccharomyces cerevisiae complexed with nadp+
|
Resolution | 2.60 Å |
|
 |
  |   |
132 | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | P | Q | H | I | L | D | M | C | T | G | S | G | C | I | A | I | A | C | A | Y | A | F | P | D | . |
. |
. |
. |
. |
A | E | V | D | A | V | D | I | S | P | D | A | L | A | V | A | E | Q | N | I | E | E | H | G | L | I | H | N | V | I | P | I | R | S | D | L | F | R |
Query Conservation |   |
  |   |   |
|
|
|
|
|
|   |
|
|
|   |
|   |
|   |
|
|   |   |   |
|   | . | . | . | . | . |   |   |
|   |
|   |
|
|
|   |   |
|
|   |   |
|   |   |
|   |   |   |   |
|
|   |   |
|
|   |   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|
|
|
|
|   |
| . |
|
|   |
|   |
|   |   |
|
|   |   |
|   |   |   |   |   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
Template Sequence |   |
A | K | K | T | V | L | I | T | G | A | S | A | G | . |
I | G | K | A | T | A | L | E | Y | L | E | A | S | N | G | D | M | K | L | I | L | A | A | R | R | L | E | K | L | E | E | L | K | K | T | I | D | Q | E | F | P | N | A | K | V | H | V | A | Q | L | D | I | T | Q |
Template Known Secondary structure |   |
T | T |
|  |  |  |  |  | S | T | T | S |  | . |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T |
|
|  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |  |
|
| T | T |
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|  | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | |
. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|