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Job DescriptionP39199
Confidence99.83%DateThu Jan 5 11:58:28 GMT 2012
Rank23Aligned Residues122
% Identity23%Templatec3ku1E_
PDB info PDB header:transferaseChain: E: PDB Molecule:sam-dependent methyltransferase; PDBTitle: crystal structure of streptococcus pneumoniae sp1610, a2 putative trna (m1a22) methyltransferase, in complex with s-3 adenosyl-l-methionine
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   131........140.........150.........160.........170.........180.........190.... .....200.........
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Query Sequence  KQPQHILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR. DLPKVQYDLIVTNPP
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Template Sequence  SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITIAGM
Template Known Secondary structure 
TS
GGGTT

SSTT
TTT
SGGGG

SSS


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   14.....20.........30.........40.........50.........60.........70.........80.........90...
 
   210.........220.........230.........240.........250.........260.........270.........
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Query Sequence  YVDAEDMSDLPNEYRHEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVGNSMVHLMEQYPDVPFT
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Template Sequence  GG. . . . . . . . . . . . . . . . . . . . . . . . . . . RLIARILEEGLGKLANVERLILQPNNREDDLRIWLQDHGFQ
Template Known Secondary structure 
...........................TTGGGGSS

SS
TT
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   94. ....100.........110.........120.........130......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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