Job Description P39199 Confidence 98.72% Date Thu Jan 5 11:58:28 GMT 2012 Rank 287 Aligned Residues 166 % Identity 17% Template c3htxA_ PDB info PDB header:transferase/rna Chain: A: PDB Molecule:hen1; PDBTitle: crystal structure of small rna methyltransferase hen1 Resolution 3.10 Å

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		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.						.
Predicted Secondary structure																																																.																												.	.	.	.	.
Query SS confidence																																																.																												.	.	.	.	.
Query Sequence		L	V	P	R	S	P	I	G	E	L	I	N	N	K	F	A	G	L	I	S	K	Q	P	Q	H	I	L	D	M	C	T	G	S	G	C	I	A	I	A	C	A	Y	A	F	P	D	.	A	E	V	D	A	V	D	I	S	P	D	A	L	A	V	A	E	Q	N	I	E	E	H	G	L	I	H	.	.	.	.	.	N
Query Conservation																																																.																												.	.	.	.	.
Alig confidence					.																																											.																												.	.	.	.	.
Template Conservation					.
Template Sequence		F	K	P	.	P	L	S	K	Q	R	V	E	Y	A	L	K	H	I	R	E	S	S	A	S	T	L	V	D	F	G	C	G	S	G	S	L	L	D	S	L	L	D	Y	P	T	S	L	Q	T	I	I	G	V	D	I	S	P	K	G	L	A	R	A	A	K	M	L	H	V	K	L	N	K	E	A	C	N	V	K	S
Template Known Secondary structure		S	S	S	.																	S			S						T		S	S	S							T	S	S												S																T	T	T	T		S	S		S
Template Predicted Secondary structure					.
Template SS confidence
		693	.	.		.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		V	I	P	I	R	S	D	L	F	R	D	L	P	K	V	Q	.	Y	D	L	I	V	T	N	P	P	Y	V	D	A	E	D	M	S	D	L	P	N	E	Y	R	H	E	P	E	L	G	L	A	S	G	T	D	G	L	K	L	T	R	R	I	L	G	N	A	A	D	Y	L	A	D	D	G	V	L	I	C	E	V	G
Query Conservation																		.
Alig confidence																		.								.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.														.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.														.
Template Sequence		A	T	L	Y	D	G	S	I	L	E	F	D	S	R	L	H	D	V	D	I	G	T	C	L	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	I	E	H	M	E	E	D	Q	A	.	.	.	.	.	.	.	.	.	.	C	E	F	G	E	K	V	L	S	L	F	H	P	.	K	L	L	I	V	S	T	P
Template Known Secondary structure							S		T	T	S			T	T	S		S								.	.	.	.	.	.	.	.	.	.	.	.	.	S		G	G	G	S						.	.	.	.	.	.	.	.	.	.										T	T			.	S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.														.
Template SS confidence
		772	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.														.	.	.	.	800	.	.	.	.	.	.											.	.	.	810	.	.	.	.	.	.	.	.	.		820	.	.	.	.	.	.	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	M	V	H	L	M	E	Q	Y	P	D	V	P	F	T	W	L	E	F	D	N	G	G	D	G	V	F	M	L	T	K	E	Q	L	I	A	A	R	E	H	F	A
Query Conservation
Alig confidence																	.	.	.	.	.
Template Conservation																	.	.	.	.	.
Template Sequence		N	Y	E	F	N	T	I	L	Q	R	S	Q	L	P	K	.	.	.	.	.	F	R	N	H	D	H	K	F	E	W	T	R	E	Q	F	N	Q	W	A	S	K	L	G
Template Known Secondary structure		B	G	G	G					T					S	S	.	.	.	.	.		S		S	S		S			B
Template Predicted Secondary structure																	.	.	.	.	.
Template SS confidence
		828	.	830	.	.	.	.	.	.	.	.	.	840	.	.						.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions