Job Description P39199 Confidence 99.67% Date Thu Jan 5 11:58:28 GMT 2012 Rank 115 Aligned Residues 133 % Identity 20% Template c3g8aF_ PDB info PDB header:transferase Chain: F: PDB Molecule:ribosomal rna small subunit methyltransferase g; PDBTitle: t. thermophilus 16s rrna g527 methyltransferase in complex with adohcy2 in space group p61 Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130							.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.
Query Sequence		P	R	S	P	I	G	E	L	I	N	N	K	F	A	G	L	I	S	.	.	.	.	.	.	K	Q	P	Q	H	I	L	D	M	C	T	G	S	G	C	I	A	I	A	C	A	Y	A	F	P	D	A	E	V	D	A	V	D	I	S	P	D	A	L	A	V	A	E	Q	N	I	E	E	H	G	L	I	H	N	V	I
Query Conservation																				.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.																																																					.
Template Conservation																																																																														.
Template Sequence		E	A	G	E	E	E	V	V	V	K	H	F	L	D	S	L	T	L	L	R	L	P	L	W	Q	G	P	L	R	V	L	D	L	G	T	G	A	G	F	P	G	L	P	L	K	I	V	R	P	E	L	E	L	V	L	V	D	A	T	R	K	K	V	A	F	V	E	R	A	I	E	V	L	G	L	K	.	G	A	R
Template Known Secondary structure																		G	G	G	G	S	S				S	S							T		T	T	T	T	T									T	T								S																T		S	.	S
Template Predicted Secondary structure																																																																														.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.
		187	.	.	190	.	.	.	.					.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure										.	.	.	.
Query SS confidence										.	.	.	.
Query Sequence		P	I	R	S	D	L	F	R	.	.	.	.	D	L	P	K	V	Q	Y	D	L	I	V	T	N	P	P	Y	V	D	A	E	D	M	S	D	L	P	N	E	Y	R	H	E	P	E	L	G	L	A	S	G	T	D	G	L	K	L	T	R	R	I	L	G	N	A	A	D	Y	L	A	D	D	G	V	L	I	C	E	V
Query Conservation										.	.	.	.
Alig confidence										.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	W	G	R	A	E	V	L	A	R	E	A	G	H	R	E	A	Y	A	R	A	V	A	R	A	V	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	C	V	L	S	E	L	L	L	P	F	L	E	V	G	G	A	A	V	A	M	K
Template Known Secondary structure											T	T	S	T	T	T	T	T										S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									G	G	G
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.																														.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		263	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	S	M	V	H	L	M	E	Q	Y	P	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	P	R	V	E	E	E	L	A	P	L	P	P
Template Known Secondary structure			S							T	T
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions