Return to main results Retrieve Phyre Job Id

Job DescriptionP39199
Confidence46.65%DateThu Jan 5 11:58:28 GMT 2012
Rank460Aligned Residues88
% Identity19%Templatec3fhlC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of a putative oxidoreductase from bacteroides2 fragilis nctc 9343
Resolution1.93 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   132.......140... .... ..150.........160. ........170.........180.........190.........200... ....
Predicted Secondary structure 






.
.



.




















.
Query SS confidence 











.



.













.









































.



Query Sequence  QPQHILDMCTGS. GCIA. IACAYAFPDAEVDA. VDISPDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDL. IVTN
Query Conservation     





 

.
 
 .
 

   
   
 
. 


  

  
  
    

  

     
          
 .

 
Alig confidence 











.



.













.




..........


























.



Template Conservation 
 






 
  
   
   
       



 
   ..........            
 
  


    

 
 
 
Template Sequence  EIIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSK. . . . . . . . . . ELSKERYPQASIVRSFKELTEDPEIDLIVVNT
Template Known Secondary structure 

S

ST
TT
SS
..........
GGGTT
TTSS
ST
TT


S
Template Predicted Secondary structure 











..........














Template SS confidence 















































































   2.......10.........20.........30......... 40.........50.........60.........70.
 
   208.210.........220.........230.........240.........250.........260.
Predicted Secondary structure 



















Query SS confidence 





















































Query Sequence  PPYVDAEDMSDLPNEYRHEPELGLASGTDGLKLTRRILGNAADYLADDGVLICE
Query Conservation 



       
      

  

 

  

     

      
 


 
 

Alig confidence 




................................
















Template Conservation 
   
................................      

 





 
Template Sequence  PDNTH. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . YEYAGMALEAGKNVVVE
Template Known Secondary structure 
GGG................................TT
Template Predicted Secondary structure 
................................



Template SS confidence 





















































   72.... ...80.........90...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions